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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182167764
OHMS01002844
405363
Bacillota
GCA
Cys
>WENV182167762
OHMS01002844
280428
Bacillota
GAA
Phe
>WENV182168112
OHMS01023849
291579
Bacillota
GAA
Phe
>WENV182167325
OHMS01000031
184114
Bacillota
GTG
His
>WENV182168184
OHMS01033103
280466
Bacillota
TAC
Val
>WENV182168306
OHMS01060484
302388
Bacillota
TGC
Ala
>WENV182168265
OHMS01046087
175842
Bacillota
CAC
Val
>WENV182167848
OHMS01005074
184497
Bacillota
GGG
Pro
>WENV182168209
OHMS01038057
295166
Bacillota
TGC
Ala
>WENV182168066
OHMS01018457
295166
Bacillota
TGC
Ala
>WENV182167838
OHMS01004486
280447
Bacillota
GAC
Val
>WENV182167734
OHMS01002308
280447
Bacillota
GAC
Val
>WENV182168083
OHMS01021027
5692
Bacillota
GCT
Ser
>WENV182167600
OHMS01000685
312274
Bacillota
GGC
Ala
>WENV182167391
OHMS01000094
186123
Bacillota
GTC
Asp
>WENV182167892
OHMS01006583
284723
Bacillota
TAC
Val
>WENV182167746
OHMS01002493
73009
Bacillota
CAG
Leu
>WENV182167933
OHMS01008667
189473
Bacillota
GAT
Ile
>WENV182167866
OHMS01005889
291581
Bacillota
CGG
Pro
>WENV182168247
OHMS01043375
175859
Bacillota
TCT
Arg
>WENV182167438
OHMS01000162
290325
Bacillota
GCC
Gly
>WENV182167627
OHMS01000827
175831
Bacillota
ACG
Arg
>WENV182167392
OHMS01000094
291634
Bacillota
GAA
Phe
>WENV182167780
OHMS01002994
176391
Bacillota
TGG
Pro
>WENV182167865
OHMS01005889
480322
Bacillota
CTG
Gln
>WENV182167755
OHMS01002695
175868
Bacillota
GTT
Asn
>WENV182167744
OHMS01002473
322848
Bacillota
CTT
Lys
>WENV182167743
OHMS01002473
398854
Bacillota
CTC
Glu
>WENV182168293
OHMS01056857
480324
Bacillota
TTG
Gln
>WENV182167376
OHMS01000071
303718
Bacillota
TGT
Thr
>WENV182167888
OHMS01006583
398857
Bacillota
TTC
Glu
>WENV182168186
OHMS01033103
280444
Bacillota
GGT
Thr
>WENV182167501
OHMS01000290
317482
Bacillota
TAC
Val
>WENV182167763
OHMS01002844
321753
Bacillota
GCC
Gly
>WENV182167906
OHMS01007118
179755
Bacillota
CCG
Arg
>WENV182168041
OHMS01015610
58120
Bacillota
AAG
Leu
>WENV182167901
OHMS01007057
46835
Bacillota
TAA
Leu
>WENV182168113
OHMS01023849
309916
Bacillota
TTT
Lys
>WENV182167556
OHMS01000471
289123
Bacillota
GGT
Thr
>WENV182167527
OHMS01000361
280483
Bacillota
GAA
Phe
>WENV182167789
OHMS01003199
175857
Bacillota
GTG
His
>WENV182167528
OHMS01000361
285756
Bacillota
GCC
Gly
>WENV182168220
OHMS01038922
398833
Bacillota
TGT
Thr
>WENV182168185
OHMS01033103
175849
Bacillota
GTC
Asp
>WENV182167489
OHMS01000263
405393
Bacillota
GCC
Gly
>WENV182168082
OHMS01021027
56074
Bacillota
TGA
Ser
>WENV182167758
OHMS01002768
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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