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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182247085
OHSM01028410
280500
Bacillota
TGC
Ala
>WENV182246915
OHSM01009382
349107
Bacillota
GCC
Gly
>WENV182246916
OHSM01009382
405363
Bacillota
GCA
Cys
>WENV182246914
OHSM01009382
280428
Bacillota
GAA
Phe
>WENV182246467
OHSM01000024
179917
Bacillota
CAT
Met
>WENV182246830
OHSM01005140
280492
Bacillota
CTT
Lys
>WENV182246811
OHSM01004130
175842
Bacillota
CAC
Val
>WENV182247159
OHSM01044820
179563
Bacillota
GAT
Ile
>WENV182246767
OHSM01002196
190476
Bacillota
CAT
Met
>WENV182246782
OHSM01002692
73664
Bacillota
CAG
Leu
>WENV182246860
OHSM01006110
280447
Bacillota
GAC
Val
>WENV182246799
OHSM01003555
5692
Bacillota
GCT
Ser
>WENV182246602
OHSM01000298
280427
Bacillota
TAC
Val
>WENV182246955
OHSM01012854
73009
Bacillota
CAG
Leu
>WENV182246772
OHSM01002306
189473
Bacillota
GAT
Ile
>WENV182246896
OHSM01008311
291581
Bacillota
CGG
Pro
>WENV182247105
OHSM01031858
175859
Bacillota
TCT
Arg
>WENV182246604
OHSM01000298
290325
Bacillota
GCC
Gly
>WENV182246895
OHSM01008311
480322
Bacillota
CTG
Gln
>WENV182246802
OHSM01003850
175868
Bacillota
GTT
Asn
>WENV182246801
OHSM01003850
398854
Bacillota
CTC
Glu
>WENV182247094
OHSM01030009
291576
Bacillota
CCC
Gly
>WENV182246884
OHSM01007578
480324
Bacillota
TTG
Gln
>WENV182246641
OHSM01000532
303718
Bacillota
TGT
Thr
>WENV182246781
OHSM01002692
56079
Bacillota
AAG
Leu
>WENV182247045
OHSM01022566
204381
Bacillota
GAT
Ile
>WENV182246660
OHSM01000705
117745
Bacillota
GTA
Tyr
>WENV182246779
OHSM01002529
280444
Bacillota
GGT
Thr
>WENV182246709
OHSM01001204
46643
Bacillota
TGA
Ser
>WENV182246625
OHSM01000401
281445
Bacillota
GTG
His
>WENV182246854
OHSM01005973
179755
Bacillota
CCG
Arg
>WENV182246768
OHSM01002196
398832
Bacillota
TTC
Glu
>WENV182247158
OHSM01044820
294275
Bacillota
TGC
Ala
>WENV182247074
OHSM01026691
280462
Bacillota
GAA
Phe
>WENV182246975
OHSM01014867
398852
Bacillota
CTC
Glu
>WENV182246638
OHSM01000514
298260
Bacillota
GTT
Asn
>WENV182247102
OHSM01031709
398833
Bacillota
TGT
Thr
>WENV182247075
OHSM01026691
280463
Bacillota
TTT
Lys
>WENV182246798
OHSM01003555
56074
Bacillota
TGA
Ser
>WENV182246886
OHSM01007635
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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