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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182261345
OHTK01015957
280500
Bacillota
TGC
Ala
>WENV182261293
OHTK01010359
349107
Bacillota
GCC
Gly
>WENV182261175
OHTK01004039
405363
Bacillota
GCA
Cys
>WENV182261112
OHTK01001996
290391
Bacillota
TAC
Val
>WENV182261292
OHTK01010359
280428
Bacillota
GAA
Phe
>WENV182260842
OHTK01000003
179917
Bacillota
CAT
Met
>WENV182260922
OHTK01000082
280492
Bacillota
CTT
Lys
>WENV182260875
OHTK01000031
280492
Bacillota
CTT
Lys
>WENV182261300
OHTK01010808
175842
Bacillota
CAC
Val
>WENV182261357
OHTK01016999
184497
Bacillota
GGG
Pro
>WENV182261247
OHTK01008107
190476
Bacillota
CAT
Met
>WENV182260981
OHTK01000245
73664
Bacillota
CAG
Leu
>WENV182261153
OHTK01003361
280447
Bacillota
GAC
Val
>WENV182261459
OHTK01039012
5692
Bacillota
GCT
Ser
>WENV182261136
OHTK01002745
73009
Bacillota
CAG
Leu
>WENV182261410
OHTK01027679
481217
Bacillota
GCA
Cys
>WENV182261404
OHTK01026123
291581
Bacillota
CGG
Pro
>WENV182261321
OHTK01012949
175859
Bacillota
TCT
Arg
>WENV182261023
OHTK01000452
21311
Bacillota
GCT
Ser
>WENV182261170
OHTK01003858
175831
Bacillota
ACG
Arg
>WENV182261372
OHTK01018872
195824
Bacillota
GAT
Ile
>WENV182261403
OHTK01026123
480322
Bacillota
CTG
Gln
>WENV182261201
OHTK01005041
175868
Bacillota
GTT
Asn
>WENV182261220
OHTK01005875
322848
Bacillota
CTT
Lys
>WENV182261219
OHTK01005875
398854
Bacillota
CTC
Glu
>WENV182261437
OHTK01034186
291576
Bacillota
CCC
Gly
>WENV182261245
OHTK01008004
480324
Bacillota
TTG
Gln
>WENV182261105
OHTK01001744
497729
Bacillota
CCA
Trp
>WENV182260876
OHTK01000032
56079
Bacillota
AAG
Leu
>WENV182260884
OHTK01000042
117745
Bacillota
GTA
Tyr
>WENV182261210
OHTK01005379
280444
Bacillota
GGT
Thr
>WENV182260978
OHTK01000237
46643
Bacillota
TGA
Ser
>WENV182261026
OHTK01000477
46835
Bacillota
TAA
Leu
>WENV182261248
OHTK01008107
398832
Bacillota
TTC
Glu
>WENV182261016
OHTK01000420
280476
Bacillota
TTT
Lys
>WENV182260913
OHTK01000072
280462
Bacillota
GAA
Phe
>WENV182261050
OHTK01000745
398852
Bacillota
CTC
Glu
>WENV182260885
OHTK01000042
398852
Bacillota
CTC
Glu
>WENV182260878
OHTK01000034
398852
Bacillota
CTC
Glu
>WENV182260844
OHTK01000004
398852
Bacillota
CTC
Glu
>WENV182261388
OHTK01021902
118370
Bacillota
TAG
Leu
>WENV182260850
OHTK01000006
175857
Bacillota
GTG
His
>WENV182261342
OHTK01015380
398833
Bacillota
TGT
Thr
>WENV182261452
OHTK01038165
285556
Bacillota
TGT
Thr
>WENV182260852
OHTK01000006
280463
Bacillota
TTT
Lys
>WENV182261356
OHTK01016968
405393
Bacillota
GCC
Gly
>WENV182261458
OHTK01039012
56074
Bacillota
TGA
Ser
>WENV182261243
OHTK01007992
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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