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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182265666
OHTW01011087
343590
Bacillota
GCC
Gly
>WENV182265656
OHTW01010418
280500
Bacillota
TGC
Ala
>WENV182265303
OHTW01000263
405363
Bacillota
GCA
Cys
>WENV182265467
OHTW01001107
280428
Bacillota
GAA
Phe
>WENV182265803
OHTW01039642
291579
Bacillota
GAA
Phe
>WENV182265375
OHTW01000507
175842
Bacillota
CAC
Val
>WENV182265564
OHTW01004416
184497
Bacillota
GGG
Pro
>WENV182265695
OHTW01015260
404079
Bacillota
CAT
Met
>WENV182265782
OHTW01032371
190476
Bacillota
CAT
Met
>WENV182265383
OHTW01000543
280447
Bacillota
GAC
Val
>WENV182265287
OHTW01000226
280447
Bacillota
GAC
Val
>WENV182265306
OHTW01000263
291581
Bacillota
CGG
Pro
>WENV182265334
OHTW01000364
175859
Bacillota
TCT
Arg
>WENV182265458
OHTW01001045
175831
Bacillota
ACG
Arg
>WENV182265570
OHTW01004709
183957
Bacillota
CCT
Arg
>WENV182265655
OHTW01010418
195824
Bacillota
GAT
Ile
>WENV182265667
OHTW01011131
27216
Bacillota
GCT
Ser
>WENV182265305
OHTW01000263
480322
Bacillota
CTG
Gln
>WENV182265229
OHTW01000113
480322
Bacillota
CTG
Gln
>WENV182265706
OHTW01017177
401685
Bacillota
TTG
Gln
>WENV182265574
OHTW01004799
175868
Bacillota
GTT
Asn
>WENV182265291
OHTW01000231
175868
Bacillota
GTT
Asn
>WENV182265637
OHTW01009482
119278
Bacillota
TAG
Leu
>WENV182265346
OHTW01000392
398854
Bacillota
CTC
Glu
>WENV182265556
OHTW01004206
291576
Bacillota
CCC
Gly
>WENV182265307
OHTW01000263
480324
Bacillota
TTG
Gln
>WENV182265181
OHTW01000038
497729
Bacillota
CCA
Trp
>WENV182265593
OHTW01005731
303718
Bacillota
TGT
Thr
>WENV182265562
OHTW01004390
323864
Bacillota
TGC
Ala
>WENV182265350
OHTW01000428
280444
Bacillota
GGT
Thr
>WENV182265465
OHTW01001107
317482
Bacillota
TAC
Val
>WENV182265722
OHTW01019370
46643
Bacillota
TGA
Ser
>WENV182265505
OHTW01001869
179755
Bacillota
CCG
Arg
>WENV182265515
OHTW01002326
330413
Bacillota
CTT
Lys
>WENV182265783
OHTW01032371
398832
Bacillota
TTC
Glu
>WENV182265487
OHTW01001432
118669
Bacillota
GTA
Tyr
>WENV182265705
OHTW01017177
175857
Bacillota
GTG
His
>WENV182265510
OHTW01002105
285756
Bacillota
GCC
Gly
>WENV182265368
OHTW01000463
398833
Bacillota
TGT
Thr
>WENV182265351
OHTW01000428
175849
Bacillota
GTC
Asp
>WENV182265644
OHTW01009863
56074
Bacillota
TGA
Ser
>WENV182265552
OHTW01003981
56074
Bacillota
TGA
Ser
>WENV182265288
OHTW01000226
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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