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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182267932
OHUA01004784
99852
Bacillota
GTA
Tyr
>WENV182268153
OHUA01028600
343590
Bacillota
GCC
Gly
>WENV182268185
OHUA01035126
280500
Bacillota
TGC
Ala
>WENV182268148
OHUA01027950
480520
Bacillota
TCC
Gly
>WENV182268232
OHUA01051455
405363
Bacillota
GCA
Cys
>WENV182267585
OHUA01000026
229015
Bacillota
GTG
His
>WENV182267825
OHUA01001802
280492
Bacillota
CTT
Lys
>WENV182268012
OHUA01008457
179563
Bacillota
GAT
Ile
>WENV182268011
OHUA01008457
295166
Bacillota
TGC
Ala
>WENV182268146
OHUA01027950
141334
Bacillota
TAG
Leu
>WENV182267924
OHUA01004349
190476
Bacillota
CAT
Met
>WENV182267987
OHUA01007407
73664
Bacillota
CAG
Leu
>WENV182268135
OHUA01025989
280447
Bacillota
GAC
Val
>WENV182267891
OHUA01003340
5692
Bacillota
GCT
Ser
>WENV182268046
OHUA01012179
186123
Bacillota
GTC
Asp
>WENV182267988
OHUA01007471
73009
Bacillota
CAG
Leu
>WENV182268077
OHUA01016242
481217
Bacillota
GCA
Cys
>WENV182268145
OHUA01027950
283502
Bacillota
TTT
Lys
>WENV182267762
OHUA01000841
291581
Bacillota
CGG
Pro
>WENV182268164
OHUA01030931
280436
Bacillota
TGC
Ala
>WENV182268150
OHUA01027950
330433
Bacillota
GTG
His
>WENV182267880
OHUA01003060
175831
Bacillota
ACG
Arg
>WENV182267584
OHUA01000026
179810
Bacillota
TCT
Arg
>WENV182268021
OHUA01009146
284627
Bacillota
GAA
Phe
>WENV182268047
OHUA01012179
291634
Bacillota
GAA
Phe
>WENV182268032
OHUA01010443
480322
Bacillota
CTG
Gln
>WENV182267881
OHUA01003084
480322
Bacillota
CTG
Gln
>WENV182267761
OHUA01000841
480322
Bacillota
CTG
Gln
>WENV182267817
OHUA01001736
175868
Bacillota
GTT
Asn
>WENV182267816
OHUA01001736
398854
Bacillota
CTC
Glu
>WENV182267954
OHUA01005668
291576
Bacillota
CCC
Gly
>WENV182267706
OHUA01000417
480324
Bacillota
TTG
Gln
>WENV182267826
OHUA01001825
497729
Bacillota
CCA
Trp
>WENV182267685
OHUA01000334
117745
Bacillota
GTA
Tyr
>WENV182267783
OHUA01001171
280444
Bacillota
GGT
Thr
>WENV182267889
OHUA01003272
483485
Bacillota
CCC
Gly
>WENV182267735
OHUA01000600
46643
Bacillota
TGA
Ser
>WENV182267959
OHUA01005819
179755
Bacillota
CCG
Arg
>WENV182267938
OHUA01005010
179755
Bacillota
CCG
Arg
>WENV182267925
OHUA01004349
398832
Bacillota
TTC
Glu
>WENV182268149
OHUA01027950
203851
Bacillota
TCT
Arg
>WENV182268005
OHUA01008263
118669
Bacillota
GTA
Tyr
>WENV182268053
OHUA01012495
398852
Bacillota
CTC
Glu
>WENV182267724
OHUA01000542
398852
Bacillota
CTC
Glu
>WENV182267677
OHUA01000316
398852
Bacillota
CTC
Glu
>WENV182268142
OHUA01027694
289123
Bacillota
GGT
Thr
>WENV182267773
OHUA01001034
406186
Bacillota
CTC
Glu
>WENV182267798
OHUA01001506
175857
Bacillota
GTG
His
>WENV182267978
OHUA01006913
398833
Bacillota
TGT
Thr
>WENV182267800
OHUA01001506
280463
Bacillota
TTT
Lys
>WENV182268206
OHUA01040986
280486
Bacillota
TGC
Ala
>WENV182268048
OHUA01012179
405393
Bacillota
GCC
Gly
>WENV182267890
OHUA01003340
56074
Bacillota
TGA
Ser
>WENV182268030
OHUA01010094
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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