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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182268517
OHUB01001076
99852
Bacillota
GTA
Tyr
>WENV182268631
OHUB01003485
99852
Bacillota
GTA
Tyr
>WENV182268762
OHUB01013045
280500
Bacillota
TGC
Ala
>WENV182268731
OHUB01008592
405363
Bacillota
GCA
Cys
>WENV182268293
OHUB01000035
290391
Bacillota
TAC
Val
>WENV182268480
OHUB01000841
184114
Bacillota
GTG
His
>WENV182268330
OHUB01000101
280492
Bacillota
CTT
Lys
>WENV182268260
OHUB01000008
280492
Bacillota
CTT
Lys
>WENV182268570
OHUB01001887
175842
Bacillota
CAC
Val
>WENV182268625
OHUB01003274
184497
Bacillota
GGG
Pro
>WENV182268549
OHUB01001464
179176
Bacillota
ACG
Arg
>WENV182268469
OHUB01000782
280447
Bacillota
GAC
Val
>WENV182268592
OHUB01002274
5692
Bacillota
GCT
Ser
>WENV182268436
OHUB01000650
5692
Bacillota
GCT
Ser
>WENV182268729
OHUB01008306
175825
Bacillota
GAT
Ile
>WENV182268516
OHUB01001076
73009
Bacillota
CAG
Leu
>WENV182268595
OHUB01002371
481217
Bacillota
GCA
Cys
>WENV182268837
OHUB01036023
294336
Bacillota
TTT
Lys
>WENV182268349
OHUB01000162
291581
Bacillota
CGG
Pro
>WENV182268514
OHUB01001076
175859
Bacillota
TCT
Arg
>WENV182268728
OHUB01008306
280436
Bacillota
TGC
Ala
>WENV182268441
OHUB01000675
175831
Bacillota
ACG
Arg
>WENV182268667
OHUB01004848
184121
Bacillota
TGG
Pro
>WENV182268529
OHUB01001184
480322
Bacillota
CTG
Gln
>WENV182268348
OHUB01000162
480322
Bacillota
CTG
Gln
>WENV182268618
OHUB01003034
401685
Bacillota
TTG
Gln
>WENV182268413
OHUB01000475
175868
Bacillota
GTT
Asn
>WENV182268525
OHUB01001166
291576
Bacillota
CCC
Gly
>WENV182268477
OHUB01000840
291576
Bacillota
CCC
Gly
>WENV182268718
OHUB01007611
175899
Bacillota
GTC
Asp
>WENV182268700
OHUB01006353
303718
Bacillota
TGT
Thr
>WENV182268412
OHUB01000474
56079
Bacillota
AAG
Leu
>WENV182268411
OHUB01000474
56079
Bacillota
AAG
Leu
>WENV182268812
OHUB01025415
186051
Bacillota
GAT
Ile
>WENV182268772
OHUB01015489
398857
Bacillota
TTC
Glu
>WENV182268290
OHUB01000032
117745
Bacillota
GTA
Tyr
>WENV182268284
OHUB01000023
46643
Bacillota
TGA
Ser
>WENV182268607
OHUB01002825
179755
Bacillota
CCG
Arg
>WENV182268558
OHUB01001655
179755
Bacillota
CCG
Arg
>WENV182268680
OHUB01005386
58120
Bacillota
AAG
Leu
>WENV182268395
OHUB01000390
198522
Bacillota
GAT
Ile
>WENV182268512
OHUB01001065
46835
Bacillota
TAA
Leu
>WENV182268799
OHUB01021372
398832
Bacillota
TTC
Glu
>WENV182268489
OHUB01000898
280476
Bacillota
TTT
Lys
>WENV182268281
OHUB01000023
280462
Bacillota
GAA
Phe
>WENV182268291
OHUB01000032
398852
Bacillota
CTC
Glu
>WENV182268289
OHUB01000031
398852
Bacillota
CTC
Glu
>WENV182268265
OHUB01000011
398852
Bacillota
CTC
Glu
>WENV182268602
OHUB01002619
285601
Bacillota
TTC
Glu
>WENV182268313
OHUB01000093
175857
Bacillota
GTG
His
>WENV182268446
OHUB01000678
285756
Bacillota
GCC
Gly
>WENV182268315
OHUB01000093
280463
Bacillota
TTT
Lys
>WENV182268780
OHUB01018555
280486
Bacillota
TGC
Ala
>WENV182268591
OHUB01002274
56074
Bacillota
TGA
Ser
>WENV182268435
OHUB01000650
56074
Bacillota
TGA
Ser
>WENV182268709
OHUB01007332
280473
Bacillota
TGG
Pro
>WENV182268509
OHUB01001046
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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