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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182269707
OHUD01006569
99852
Bacillota
GTA
Tyr
>WENV182269428
OHUD01000217
343590
Bacillota
GCC
Gly
>WENV182269415
OHUD01000165
280500
Bacillota
TGC
Ala
>WENV182269726
OHUD01007817
405363
Bacillota
GCA
Cys
>WENV182269390
OHUD01000125
229015
Bacillota
GTG
His
>WENV182269576
OHUD01001714
280492
Bacillota
CTT
Lys
>WENV182269590
OHUD01002093
175842
Bacillota
CAC
Val
>WENV182269432
OHUD01000257
295166
Bacillota
TGC
Ala
>WENV182269634
OHUD01003361
190476
Bacillota
CAT
Met
>WENV182269785
OHUD01012106
73664
Bacillota
CAG
Leu
>WENV182269527
OHUD01000917
73664
Bacillota
CAG
Leu
>WENV182269731
OHUD01008144
280447
Bacillota
GAC
Val
>WENV182269686
OHUD01005445
280447
Bacillota
GAC
Val
>WENV182269639
OHUD01003824
280447
Bacillota
GAC
Val
>WENV182269492
OHUD01000622
5692
Bacillota
GCT
Ser
>WENV182269406
OHUD01000142
186123
Bacillota
GTC
Asp
>WENV182269692
OHUD01005694
73009
Bacillota
CAG
Leu
>WENV182269540
OHUD01001076
291581
Bacillota
CGG
Pro
>WENV182269712
OHUD01006947
175859
Bacillota
TCT
Arg
>WENV182269592
OHUD01002195
175831
Bacillota
ACG
Arg
>WENV182269477
OHUD01000495
284627
Bacillota
GAA
Phe
>WENV182269407
OHUD01000142
291634
Bacillota
GAA
Phe
>WENV182269358
OHUD01000075
346451
Bacillota
TTT
Lys
>WENV182269578
OHUD01001757
480322
Bacillota
CTG
Gln
>WENV182269539
OHUD01001076
480322
Bacillota
CTG
Gln
>WENV182269648
OHUD01003949
175868
Bacillota
GTT
Asn
>WENV182269549
OHUD01001366
398854
Bacillota
CTC
Glu
>WENV182269548
OHUD01001338
291576
Bacillota
CCC
Gly
>WENV182269532
OHUD01000976
291576
Bacillota
CCC
Gly
>WENV182269498
OHUD01000686
480324
Bacillota
TTG
Gln
>WENV182269451
OHUD01000370
497729
Bacillota
CCA
Trp
>WENV182269337
OHUD01000035
56079
Bacillota
AAG
Leu
>WENV182269895
OHUD01024016
398857
Bacillota
TTC
Glu
>WENV182269521
OHUD01000884
204381
Bacillota
GAT
Ile
>WENV182269473
OHUD01000470
117745
Bacillota
GTA
Tyr
>WENV182269617
OHUD01002914
280444
Bacillota
GGT
Thr
>WENV182269632
OHUD01003317
46643
Bacillota
TGA
Ser
>WENV182269355
OHUD01000069
281445
Bacillota
GTG
His
>WENV182269706
OHUD01006559
223045
Bacillota
GAT
Ile
>WENV182269647
OHUD01003892
179755
Bacillota
CCG
Arg
>WENV182269517
OHUD01000847
46835
Bacillota
TAA
Leu
>WENV182269635
OHUD01003361
398832
Bacillota
TTC
Glu
>WENV182269466
OHUD01000415
118669
Bacillota
GTA
Tyr
>WENV182269516
OHUD01000847
175915
Bacillota
GTC
Asp
>WENV182269373
OHUD01000092
280476
Bacillota
TTT
Lys
>WENV182269381
OHUD01000107
280462
Bacillota
GAA
Phe
>WENV182269499
OHUD01000698
398852
Bacillota
CTC
Glu
>WENV182269443
OHUD01000324
398852
Bacillota
CTC
Glu
>WENV182269353
OHUD01000067
398852
Bacillota
CTC
Glu
>WENV182269296
OHUD01000001
398852
Bacillota
CTC
Glu
>WENV182269295
OHUD01000001
398852
Bacillota
CTC
Glu
>WENV182269294
OHUD01000001
398852
Bacillota
CTC
Glu
>WENV182269481
OHUD01000547
289123
Bacillota
GGT
Thr
>WENV182269469
OHUD01000442
285601
Bacillota
TTC
Glu
>WENV182269696
OHUD01006013
398833
Bacillota
TGT
Thr
>WENV182269616
OHUD01002914
175849
Bacillota
GTC
Asp
>WENV182269382
OHUD01000107
280463
Bacillota
TTT
Lys
>WENV182269505
OHUD01000754
405393
Bacillota
GCC
Gly
>WENV182269491
OHUD01000622
56074
Bacillota
TGA
Ser
>WENV182269589
OHUD01002085
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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