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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182277003
OHUQ01003432
99852
Bacillota
GTA
Tyr
>WENV182276953
OHUQ01000860
285945
Bacillota
TTT
Lys
>WENV182276823
OHUQ01000004
179917
Bacillota
CAT
Met
>WENV182276824
OHUQ01000004
302145
Bacillota
GAA
Phe
>WENV182276834
OHUQ01000006
280492
Bacillota
CTT
Lys
>WENV182276901
OHUQ01000115
175842
Bacillota
CAC
Val
>WENV182276972
OHUQ01001504
295166
Bacillota
TGC
Ala
>WENV182277035
OHUQ01008018
190476
Bacillota
CAT
Met
>WENV182276887
OHUQ01000069
190476
Bacillota
CAT
Met
>WENV182276844
OHUQ01000010
73664
Bacillota
CAG
Leu
>WENV182276896
OHUQ01000085
280447
Bacillota
GAC
Val
>WENV182276939
OHUQ01000575
5692
Bacillota
GCT
Ser
>WENV182277013
OHUQ01003897
73009
Bacillota
CAG
Leu
>WENV182276892
OHUQ01000074
291581
Bacillota
CGG
Pro
>WENV182277004
OHUQ01003505
175859
Bacillota
TCT
Arg
>WENV182276893
OHUQ01000079
175859
Bacillota
TCT
Arg
>WENV182276871
OHUQ01000046
294020
Bacillota
TAC
Val
>WENV182276986
OHUQ01002605
327598
Bacillota
CTT
Lys
>WENV182276952
OHUQ01000860
282730
Bacillota
TAC
Val
>WENV182276891
OHUQ01000074
480322
Bacillota
CTG
Gln
>WENV182276895
OHUQ01000082
175868
Bacillota
GTT
Asn
>WENV182276910
OHUQ01000201
322848
Bacillota
CTT
Lys
>WENV182276909
OHUQ01000201
398854
Bacillota
CTC
Glu
>WENV182276857
OHUQ01000021
291576
Bacillota
CCC
Gly
>WENV182276907
OHUQ01000155
480324
Bacillota
TTG
Gln
>WENV182276843
OHUQ01000010
56079
Bacillota
AAG
Leu
>WENV182276842
OHUQ01000010
56079
Bacillota
AAG
Leu
>WENV182276928
OHUQ01000335
404126
Bacillota
GCC
Gly
>WENV182276858
OHUQ01000023
117745
Bacillota
GTA
Tyr
>WENV182276862
OHUQ01000024
280444
Bacillota
GGT
Thr
>WENV182276859
OHUQ01000024
280444
Bacillota
GGT
Thr
>WENV182277019
OHUQ01004760
291597
Bacillota
TGC
Ala
>WENV182276849
OHUQ01000012
46643
Bacillota
TGA
Ser
>WENV182276911
OHUQ01000209
321753
Bacillota
GCC
Gly
>WENV182276932
OHUQ01000386
179755
Bacillota
CCG
Arg
>WENV182276888
OHUQ01000069
398832
Bacillota
TTC
Glu
>WENV182276850
OHUQ01000012
280462
Bacillota
GAA
Phe
>WENV182276927
OHUQ01000297
398852
Bacillota
CTC
Glu
>WENV182276840
OHUQ01000008
398852
Bacillota
CTC
Glu
>WENV182276818
OHUQ01000003
398852
Bacillota
CTC
Glu
>WENV182276921
OHUQ01000279
184539
Bacillota
TCT
Arg
>WENV182276968
OHUQ01001351
280483
Bacillota
GAA
Phe
>WENV182276877
OHUQ01000049
175857
Bacillota
GTG
His
>WENV182276969
OHUQ01001351
285756
Bacillota
GCC
Gly
>WENV182276886
OHUQ01000064
398833
Bacillota
TGT
Thr
>WENV182276861
OHUQ01000024
175849
Bacillota
GTC
Asp
>WENV182276879
OHUQ01000049
280463
Bacillota
TTT
Lys
>WENV182276851
OHUQ01000012
280463
Bacillota
TTT
Lys
>WENV182276938
OHUQ01000575
56074
Bacillota
TGA
Ser
>WENV182276906
OHUQ01000135
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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