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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182331330
OHZI01000320
99852
Bacillota
GTA
Tyr
>WENV182331389
OHZI01001098
405363
Bacillota
GCA
Cys
>WENV182331251
OHZI01000035
280428
Bacillota
GAA
Phe
>WENV182331327
OHZI01000295
291579
Bacillota
GAA
Phe
>WENV182331431
OHZI01002049
291579
Bacillota
GAA
Phe
>WENV182331547
OHZI01007554
178666
Bacillota
GAT
Ile
>WENV182331384
OHZI01000989
280492
Bacillota
CTT
Lys
>WENV182331271
OHZI01000081
280492
Bacillota
CTT
Lys
>WENV182331258
OHZI01000049
175842
Bacillota
CAC
Val
>WENV182331372
OHZI01000847
184497
Bacillota
GGG
Pro
>WENV182331569
OHZI01009511
179563
Bacillota
GAT
Ile
>WENV182331351
OHZI01000542
179176
Bacillota
ACG
Arg
>WENV182331526
OHZI01004887
184687
Bacillota
CAT
Met
>WENV182331568
OHZI01009511
295166
Bacillota
TGC
Ala
>WENV182331513
OHZI01004219
295166
Bacillota
TGC
Ala
>WENV182331265
OHZI01000057
73664
Bacillota
CAG
Leu
>WENV182331301
OHZI01000173
280447
Bacillota
GAC
Val
>WENV182331256
OHZI01000047
5692
Bacillota
GCT
Ser
>WENV182331329
OHZI01000320
73009
Bacillota
CAG
Leu
>WENV182331284
OHZI01000104
73009
Bacillota
CAG
Leu
>WENV182331413
OHZI01001667
291581
Bacillota
CGG
Pro
>WENV182331441
OHZI01002167
175859
Bacillota
TCT
Arg
>WENV182331282
OHZI01000104
175859
Bacillota
TCT
Arg
>WENV182331369
OHZI01000742
175831
Bacillota
ACG
Arg
>WENV182331652
OHZI01020844
46805
Bacillota
>WENV182331412
OHZI01001667
480322
Bacillota
CTG
Gln
>WENV182331347
OHZI01000473
401685
Bacillota
TTG
Gln
>WENV182331390
OHZI01001102
175868
Bacillota
GTT
Asn
>WENV182331357
OHZI01000617
175868
Bacillota
GTT
Asn
>WENV182331628
OHZI01018009
119278
Bacillota
TAG
Leu
>WENV182331356
OHZI01000617
398854
Bacillota
CTC
Glu
>WENV182331267
OHZI01000064
291576
Bacillota
CCC
Gly
>WENV182331275
OHZI01000089
480324
Bacillota
TTG
Gln
>WENV182331417
OHZI01001832
407858
Bacillota
GCC
Gly
>WENV182331293
OHZI01000145
175899
Bacillota
GTC
Asp
>WENV182331422
OHZI01001923
56079
Bacillota
AAG
Leu
>WENV182331445
OHZI01002358
398857
Bacillota
TTC
Glu
>WENV182331382
OHZI01000978
280444
Bacillota
GGT
Thr
>WENV182331381
OHZI01000978
280444
Bacillota
GGT
Thr
>WENV182331396
OHZI01001167
46643
Bacillota
TGA
Ser
>WENV182331663
OHZI01022446
20427
Bacillota
TGA
Ser
>WENV182331403
OHZI01001433
179755
Bacillota
CCG
Arg
>WENV182331376
OHZI01000901
179755
Bacillota
CCG
Arg
>WENV182331302
OHZI01000180
179755
Bacillota
CCG
Arg
>WENV182331270
OHZI01000077
179755
Bacillota
CCG
Arg
>WENV182331554
OHZI01008472
291650
Bacillota
TGC
Ala
>WENV182331530
OHZI01005180
46835
Bacillota
TAA
Leu
>WENV182331313
OHZI01000230
398832
Bacillota
TTC
Glu
>WENV182331426
OHZI01002049
175915
Bacillota
GTC
Asp
>WENV182331309
OHZI01000219
398852
Bacillota
CTC
Glu
>WENV182331287
OHZI01000116
398852
Bacillota
CTC
Glu
>WENV182331458
OHZI01002837
285601
Bacillota
TTC
Glu
>WENV182331346
OHZI01000473
175857
Bacillota
GTG
His
>WENV182331454
OHZI01002758
398833
Bacillota
TGT
Thr
>WENV182331380
OHZI01000978
175849
Bacillota
GTC
Asp
>WENV182331478
OHZI01003174
280463
Bacillota
TTT
Lys
>WENV182331578
OHZI01010042
280486
Bacillota
TGC
Ala
>WENV182331255
OHZI01000047
56074
Bacillota
TGA
Ser
>WENV182331274
OHZI01000086
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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