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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182336014
OHZS01001435
482602
Actinomycetota
CCC
Gly
>WENV182335869
OHZS01000322
176499
Actinomycetota
CAT
Met
>WENV182336077
OHZS01002658
175883
Actinomycetota
GAT
Ile
>WENV182335738
OHZS01000014
280498
Actinomycetota
GTT
Asn
>WENV182335764
OHZS01000042
280498
Actinomycetota
GTT
Asn
>WENV182336405
OHZS01020053
280503
Actinomycetota
CCT
Arg
>WENV182336027
OHZS01001605
459899
Actinomycetota
TTC
Glu
>WENV182336165
OHZS01005332
56083
Actinomycetota
CGA
Ser
>WENV182335840
OHZS01000214
140768
Actinomycetota
TAG
Leu
>WENV182336575
OHZS01043798
175848
Actinomycetota
TGG
Pro
>WENV182335746
OHZS01000019
175837
Actinomycetota
ACG
Arg
>WENV182336327
OHZS01014166
280549
Actinomycetota
CAC
Val
>WENV182335872
OHZS01000337
280441
Actinomycetota
CCG
Arg
>WENV182336330
OHZS01014483
280702
Actinomycetota
GGC
Ala
>WENV182336035
OHZS01001680
398843
Actinomycetota
GTT
Asn
>WENV182336034
OHZS01001680
398843
Actinomycetota
GTT
Asn
>WENV182336012
OHZS01001376
241064
Actinomycetota
CTC
Glu
>WENV182335741
OHZS01000014
176638
Actinomycetota
GGG
Pro
>WENV182335824
OHZS01000169
280524
Actinomycetota
TGC
Ala
>WENV182335913
OHZS01000562
291585
Actinomycetota
GCC
Gly
>WENV182336386
OHZS01018575
117777
Actinomycetota
>WENV182335936
OHZS01000703
280523
Actinomycetota
GGC
Ala
>WENV182336154
OHZS01004901
280536
Actinomycetota
CTT
Lys
>WENV182336171
OHZS01005522
280496
Actinomycetota
CGT
Thr
>WENV182336026
OHZS01001605
175872
Actinomycetota
GTC
Asp
>WENV182336424
OHZS01021436
280703
Actinomycetota
CCT
Arg
>WENV182335835
OHZS01000204
20205
Actinomycetota
GCT
Ser
>WENV182335890
OHZS01000442
175926
Actinomycetota
CAT
Met
>WENV182335971
OHZS01000933
280450
Actinomycetota
TTT
Lys
>WENV182336230
OHZS01007302
323758
Actinomycetota
CGT
Thr
>WENV182335878
OHZS01000363
480329
Actinomycetota
CCC
Gly
>WENV182336011
OHZS01001376
483206
Actinomycetota
CTG
Gln
>WENV182335754
OHZS01000026
175882
Actinomycetota
TGG
Pro
>WENV182335811
OHZS01000126
20209
Actinomycetota
GAG
Leu
>WENV182335935
OHZS01000703
480319
Actinomycetota
TTG
Gln
>WENV182335826
OHZS01000176
280489
Actinomycetota
CTC
Glu
>WENV182335832
OHZS01000192
280499
Actinomycetota
CCT
Arg
>WENV182336264
OHZS01008913
297606
Actinomycetota
CCT
Arg
>WENV182335827
OHZS01000176
398853
Actinomycetota
CTG
Gln
>WENV182335753
OHZS01000026
175843
Actinomycetota
CAA
Leu
>WENV182335814
OHZS01000141
237585
Actinomycetota
TAC
Val
>WENV182336023
OHZS01001538
203883
Actinomycetota
TCT
Arg
>WENV182335887
OHZS01000425
46642
Actinomycetota
CGA
Ser
>WENV182335877
OHZS01000363
104211
Actinomycetota
CAG
Leu
>WENV182335868
OHZS01000322
117903
Actinomycetota
GTA
Tyr
>WENV182335861
OHZS01000286
56071
Actinomycetota
TGA
Ser
>WENV182335752
OHZS01000026
147796
Actinomycetota
TAA
Leu
>WENV182335839
OHZS01000214
280470
Actinomycetota
CGT
Thr
>WENV182336289
OHZS01010831
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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