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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182377393
OIDF01007702
99852
Bacillota
GTA
Tyr
>WENV182377523
OIDF01029036
280500
Bacillota
TGC
Ala
>WENV182377588
OIDF01045942
480520
Bacillota
TCC
Gly
>WENV182377237
OIDF01001398
405363
Bacillota
GCA
Cys
>WENV182377111
OIDF01000620
280428
Bacillota
GAA
Phe
>WENV182377502
OIDF01025725
291579
Bacillota
GAA
Phe
>WENV182377149
OIDF01000769
184114
Bacillota
GTG
His
>WENV182376951
OIDF01000215
280492
Bacillota
CTT
Lys
>WENV182376884
OIDF01000130
280492
Bacillota
CTT
Lys
>WENV182377185
OIDF01000983
175842
Bacillota
CAC
Val
>WENV182377395
OIDF01008760
184497
Bacillota
GGG
Pro
>WENV182377603
OIDF01051345
184687
Bacillota
CAT
Met
>WENV182377365
OIDF01006031
295166
Bacillota
TGC
Ala
>WENV182377314
OIDF01003109
190476
Bacillota
CAT
Met
>WENV182377212
OIDF01001166
190476
Bacillota
CAT
Met
>WENV182377403
OIDF01010619
176014
Bacillota
TCT
Arg
>WENV182377479
OIDF01022717
284506
Bacillota
CCA
Trp
>WENV182377413
OIDF01012021
73664
Bacillota
CAG
Leu
>WENV182377216
OIDF01001212
280447
Bacillota
GAC
Val
>WENV182377022
OIDF01000349
280447
Bacillota
GAC
Val
>WENV182377241
OIDF01001422
5692
Bacillota
GCT
Ser
>WENV182377083
OIDF01000519
73009
Bacillota
CAG
Leu
>WENV182377302
OIDF01002870
481217
Bacillota
GCA
Cys
>WENV182377140
OIDF01000715
291581
Bacillota
CGG
Pro
>WENV182377143
OIDF01000750
175859
Bacillota
TCT
Arg
>WENV182377025
OIDF01000364
175859
Bacillota
TCT
Arg
>WENV182377278
OIDF01002200
21311
Bacillota
GCT
Ser
>WENV182377359
OIDF01005595
21311
Bacillota
GCT
Ser
>WENV182377225
OIDF01001291
175831
Bacillota
ACG
Arg
>WENV182377552
OIDF01035261
184121
Bacillota
TGG
Pro
>WENV182377198
OIDF01001100
480322
Bacillota
CTG
Gln
>WENV182377139
OIDF01000715
480322
Bacillota
CTG
Gln
>WENV182377206
OIDF01001133
175868
Bacillota
GTT
Asn
>WENV182377076
OIDF01000507
175868
Bacillota
GTT
Asn
>WENV182377205
OIDF01001133
398854
Bacillota
CTC
Glu
>WENV182376948
OIDF01000206
291576
Bacillota
CCC
Gly
>WENV182376907
OIDF01000152
480324
Bacillota
TTG
Gln
>WENV182376748
OIDF01000031
175899
Bacillota
GTC
Asp
>WENV182377530
OIDF01030544
73638
Bacillota
AAG
Leu
>WENV182377197
OIDF01001078
56079
Bacillota
AAG
Leu
>WENV182377360
OIDF01005716
186051
Bacillota
GAT
Ile
>WENV182377059
OIDF01000452
117745
Bacillota
GTA
Tyr
>WENV182376940
OIDF01000188
280444
Bacillota
GGT
Thr
>WENV182376939
OIDF01000188
280444
Bacillota
GGT
Thr
>WENV182377063
OIDF01000459
46643
Bacillota
TGA
Ser
>WENV182377102
OIDF01000575
179755
Bacillota
CCG
Arg
>WENV182377290
OIDF01002429
46835
Bacillota
TAA
Leu
>WENV182377315
OIDF01003109
398832
Bacillota
TTC
Glu
>WENV182377213
OIDF01001166
398832
Bacillota
TTC
Glu
>WENV182377230
OIDF01001300
280476
Bacillota
TTT
Lys
>WENV182377043
OIDF01000431
280462
Bacillota
GAA
Phe
>WENV182376875
OIDF01000125
398852
Bacillota
CTC
Glu
>WENV182376764
OIDF01000035
398852
Bacillota
CTC
Glu
>WENV182376755
OIDF01000031
175857
Bacillota
GTG
His
>WENV182377586
OIDF01045942
141617
Bacillota
TAG
Leu
>WENV182377210
OIDF01001159
398833
Bacillota
TGT
Thr
>WENV182376938
OIDF01000188
175849
Bacillota
GTC
Asp
>WENV182377044
OIDF01000431
280463
Bacillota
TTT
Lys
>WENV182376757
OIDF01000031
280463
Bacillota
TTT
Lys
>WENV182377240
OIDF01001422
56074
Bacillota
TGA
Ser
>WENV182377071
OIDF01000476
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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