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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182408967
OIFG01000139
178658
Actinomycetota
CAA
Leu
>WENV182408869
OIFG01000045
179231
Actinomycetota
TAC
Val
>WENV182408847
OIFG01000033
176499
Actinomycetota
CAT
Met
>WENV182408890
OIFG01000062
280498
Actinomycetota
GTT
Asn
>WENV182408986
OIFG01000212
280498
Actinomycetota
GTT
Asn
>WENV182408998
OIFG01000264
280498
Actinomycetota
GTT
Asn
>WENV182408781
OIFG01000006
140768
Actinomycetota
TAG
Leu
>WENV182408861
OIFG01000040
175837
Actinomycetota
ACG
Arg
>WENV182408816
OIFG01000023
280441
Actinomycetota
CCG
Arg
>WENV182408896
OIFG01000062
176638
Actinomycetota
GGG
Pro
>WENV182408931
OIFG01000104
280524
Actinomycetota
TGC
Ala
>WENV182408910
OIFG01000074
176723
Actinomycetota
TCT
Arg
>WENV182408782
OIFG01000006
281239
Actinomycetota
TTT
Lys
>WENV182408985
OIFG01000212
280523
Actinomycetota
GGC
Ala
>WENV182408932
OIFG01000104
280523
Actinomycetota
GGC
Ala
>WENV182408909
OIFG01000071
176555
Actinomycetota
CAT
Met
>WENV182408848
OIFG01000033
20205
Actinomycetota
GCT
Ser
>WENV182408784
OIFG01000006
480329
Actinomycetota
CCC
Gly
>WENV182408973
OIFG01000165
175882
Actinomycetota
TGG
Pro
>WENV182408976
OIFG01000171
480319
Actinomycetota
TTG
Gln
>WENV182408785
OIFG01000006
280489
Actinomycetota
CTC
Glu
>WENV182408982
OIFG01000193
280499
Actinomycetota
CCT
Arg
>WENV182408786
OIFG01000006
398853
Actinomycetota
CTG
Gln
>WENV182408846
OIFG01000033
117903
Actinomycetota
GTA
Tyr
>WENV182408780
OIFG01000006
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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