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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182427085
OIHT01000599
99852
Bacillota
GTA
Tyr
>WENV182427108
OIHT01001513
280500
Bacillota
TGC
Ala
>WENV182427169
OIHT01004897
290391
Bacillota
TAC
Val
>WENV182427091
OIHT01000737
405357
Bacillota
TTC
Glu
>WENV182427155
OIHT01003874
398935
Bacillota
>WENV182427165
OIHT01004625
289717
Bacillota
CTT
Lys
>WENV182427124
OIHT01002142
20932
Bacillota
GCT
Ser
>WENV182427138
OIHT01002974
291553
Bacillota
GAA
Phe
>WENV182427160
OIHT01004061
190476
Bacillota
CAT
Met
>WENV182427125
OIHT01002211
482593
Bacillota
CCC
Gly
>WENV182427130
OIHT01002504
20942
Bacillota
GGA
Ser
>WENV182427195
OIHT01010046
184171
Bacillota
CAT
Met
>WENV182427136
OIHT01002790
47161
Bacillota
>WENV182427071
OIHT01000212
184495
Bacillota
CAT
Met
>WENV182427186
OIHT01007764
141202
Bacillota
CAA
Leu
>WENV182427114
OIHT01001663
293309
Bacillota
GTT
Asn
>WENV182427067
OIHT01000212
289713
Bacillota
TGT
Thr
>WENV182427153
OIHT01003874
119278
Bacillota
TAG
Leu
>WENV182427168
OIHT01004897
180688
Bacillota
GTC
Asp
>WENV182427083
OIHT01000590
480337
Bacillota
TCC
Gly
>WENV182427159
OIHT01003972
280444
Bacillota
GGT
Thr
>WENV182427096
OIHT01000760
119459
Bacillota
TAG
Leu
>WENV182427206
OIHT01012333
179755
Bacillota
CCG
Arg
>WENV182427137
OIHT01002974
280547
Bacillota
GTC
Asp
>WENV182427161
OIHT01004061
398832
Bacillota
TTC
Glu
>WENV182427094
OIHT01000737
175915
Bacillota
GTC
Asp
>WENV182427116
OIHT01001663
289715
Bacillota
TAC
Val
>WENV182427074
OIHT01000272
280476
Bacillota
TTT
Lys
>WENV182427097
OIHT01000790
20943
Bacillota
CGA
Ser
>WENV182427084
OIHT01000590
184539
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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