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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182443723
OIKO01003515
184537
Bacillota
ACG
Arg
>WENV182443678
OIKO01001092
408526
Bacillota
GCA
Cys
>WENV182443732
OIKO01004433
282753
Bacillota
TAC
Val
>WENV182443756
OIKO01007432
291579
Bacillota
GAA
Phe
>WENV182443704
OIKO01001949
296855
Bacillota
GGT
Thr
>WENV182443713
OIKO01002934
48505
Bacillota
TGA
Ser
>WENV182443750
OIKO01006490
312230
Bacillota
CAT
Met
>WENV182443724
OIKO01003549
482593
Bacillota
CCC
Gly
>WENV182443711
OIKO01002704
20942
Bacillota
GGA
Ser
>WENV182443665
OIKO01000787
280646
Bacillota
TGC
Ala
>WENV182443738
OIKO01005468
407726
Bacillota
CTG
Gln
>WENV182443660
OIKO01000677
398835
Bacillota
GCC
Gly
>WENV182443737
OIKO01004846
141202
Bacillota
CAA
Leu
>WENV182443701
OIKO01001949
289713
Bacillota
TGT
Thr
>WENV182443673
OIKO01001092
404091
Bacillota
TTG
Gln
>WENV182443672
OIKO01001092
289716
Bacillota
GTG
His
>WENV182443706
OIKO01002257
73638
Bacillota
AAG
Leu
>WENV182443740
OIKO01005762
182384
Bacillota
TCT
Arg
>WENV182443675
OIKO01001092
432453
Bacillota
TTC
Glu
>WENV182443743
OIKO01005954
480337
Bacillota
TCC
Gly
>WENV182443734
OIKO01004638
119459
Bacillota
TAG
Leu
>WENV182443744
OIKO01006080
333281
Bacillota
GTT
Asn
>WENV182443718
OIKO01003457
280547
Bacillota
GTC
Asp
>WENV182443746
OIKO01006490
127792
Bacillota
TAG
Leu
>WENV182443674
OIKO01001092
289761
Bacillota
TTT
Lys
>WENV182443730
OIKO01004229
283367
Bacillota
GCC
Gly
>WENV182443676
OIKO01001092
289715
Bacillota
TAC
Val
>WENV182443725
OIKO01003875
332651
Bacillota
GTT
Asn
>WENV182443742
OIKO01005954
208539
Bacillota
TGG
Pro
>WENV182443690
OIKO01001444
321248
Bacillota
TAC
Val
>WENV182443731
OIKO01004433
399261
Bacillota
>WENV182443688
OIKO01001303
280486
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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