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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182541684
OJAU01000508
398995
Alphaproteobacteria
CAC
Val
>WENV182541770
OJAU01001282
190614
Alphaproteobacteria
TGG
Pro
>WENV182541833
OJAU01005260
296698
Alphaproteobacteria
CGC
Ala
>WENV182541806
OJAU01002946
400930
Alphaproteobacteria
GAA
Phe
>WENV182541594
OJAU01000078
29841
Alphaproteobacteria
GGA
Ser
>WENV182541752
OJAU01000998
29841
Alphaproteobacteria
GGA
Ser
>WENV182541821
OJAU01003485
29841
Alphaproteobacteria
GGA
Ser
>WENV182541712
OJAU01000589
140876
Alphaproteobacteria
>WENV182541828
OJAU01004848
193463
Alphaproteobacteria
CCT
Arg
>WENV182541757
OJAU01001052
178725
Alphaproteobacteria
GTG
His
>WENV182541787
OJAU01001852
201940
Alphaproteobacteria
CAT
Met
>WENV182541865
OJAU01013903
481802
Alphaproteobacteria
TCC
Gly
>WENV182541781
OJAU01001569
140893
Alphaproteobacteria
CAA
Leu
>WENV182541862
OJAU01011569
400518
Alphaproteobacteria
GAA
Phe
>WENV182541526
OJAU01000006
178263
Alphaproteobacteria
GTG
His
>WENV182541611
OJAU01000114
197241
Alphaproteobacteria
GGG
Pro
>WENV182541793
OJAU01002210
100185
Alphaproteobacteria
GAG
Leu
>WENV182541641
OJAU01000213
73490
Alphaproteobacteria
GAG
Leu
>WENV182541520
OJAU01000006
288727
Alphaproteobacteria
>WENV182541815
OJAU01003260
399480
Alphaproteobacteria
GAA
Phe
>WENV182541688
OJAU01000523
400384
Alphaproteobacteria
TTC
Glu
>WENV182541819
OJAU01003473
400384
Alphaproteobacteria
TTC
Glu
>WENV182541896
OJAU01025681
282977
Alphaproteobacteria
CAT
Met
>WENV182541715
OJAU01000616
400514
Alphaproteobacteria
TTG
Gln
>WENV182541861
OJAU01011194
178734
Alphaproteobacteria
TGG
Pro
>WENV182541774
OJAU01001411
180029
Alphaproteobacteria
CAT
Met
>WENV182541655
OJAU01000282
140932
Alphaproteobacteria
>WENV182541765
OJAU01001242
405688
Alphaproteobacteria
GTT
Asn
>WENV182541515
OJAU01000005
178733
Alphaproteobacteria
CAT
Met
>WENV182541788
OJAU01001868
140892
Alphaproteobacteria
TAG
Leu
>WENV182541758
OJAU01001060
178509
Alphaproteobacteria
CCT
Arg
>WENV182541686
OJAU01000509
29729
Alphaproteobacteria
GCT
Ser
>WENV182541857
OJAU01009672
192131
Alphaproteobacteria
GTC
Asp
>WENV182541563
OJAU01000033
281409
Alphaproteobacteria
TTT
Lys
>WENV182541718
OJAU01000640
398999
Alphaproteobacteria
GGT
Thr
>WENV182541763
OJAU01001172
100184
Alphaproteobacteria
CAG
Leu
>WENV182541822
OJAU01003504
73167
Alphaproteobacteria
GAG
Leu
>WENV182541775
OJAU01001463
178503
Alphaproteobacteria
GGG
Pro
>WENV182541725
OJAU01000725
29727
Alphaproteobacteria
CGA
Ser
>WENV182541660
OJAU01000316
283510
Alphaproteobacteria
TTT
Lys
>WENV182541760
OJAU01001085
283510
Alphaproteobacteria
TTT
Lys
>WENV182541885
OJAU01021600
192275
Alphaproteobacteria
GTG
His
>WENV182541522
OJAU01000006
210458
Alphaproteobacteria
CGG
Pro
>WENV182541814
OJAU01003165
156125
Alphaproteobacteria
TCT
Arg
>WENV182541839
OJAU01006393
400517
Alphaproteobacteria
GGT
Thr
>WENV182541582
OJAU01000068
481098
Alphaproteobacteria
CTG
Gln
>WENV182541766
OJAU01001247
481326
Alphaproteobacteria
GCA
Cys
>WENV182541726
OJAU01000726
400515
Alphaproteobacteria
GAC
Val
>WENV182541730
OJAU01000800
400515
Alphaproteobacteria
GAC
Val
>WENV182541576
OJAU01000049
398994
Alphaproteobacteria
GTT
Asn
>WENV182541574
OJAU01000049
179720
Alphaproteobacteria
TGG
Pro
>WENV182541780
OJAU01001523
283556
Alphaproteobacteria
TTT
Lys
>WENV182541761
OJAU01001125
399000
Alphaproteobacteria
TTC
Glu
>WENV182541698
OJAU01000532
281676
Alphaproteobacteria
TAC
Val
>WENV182541782
OJAU01001691
481096
Alphaproteobacteria
CCC
Gly
>WENV182541860
OJAU01009833
282981
Alphaproteobacteria
CCA
Trp
>WENV182541571
OJAU01000044
481099
Alphaproteobacteria
TCC
Gly
>WENV182541713
OJAU01000602
190609
Alphaproteobacteria
TCT
Arg
>WENV182541875
OJAU01016851
411290
Alphaproteobacteria
CAC
Val
>WENV182541606
OJAU01000102
398996
Alphaproteobacteria
GCC
Gly
>WENV182541825
OJAU01004080
398996
Alphaproteobacteria
GCC
Gly
>WENV182541704
OJAU01000544
118150
Alphaproteobacteria
TAG
Leu
>WENV182541525
OJAU01000006
102909
Alphaproteobacteria
GTA
Tyr
>WENV182541881
OJAU01019729
13340
Alphaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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