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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182556028
OJDF01004562
328691
Gammaproteobacteria
GGT
Thr
>WENV182556037
OJDF01005801
73863
Gammaproteobacteria
CAG
Leu
>WENV182556035
OJDF01005187
178474
Gammaproteobacteria
TCT
Arg
>WENV182555995
OJDF01000955
140925
Gammaproteobacteria
GTA
Tyr
>WENV182555980
OJDF01000001
480516
Gammaproteobacteria
GCA
Cys
>WENV182555999
OJDF01000985
181513
Gammaproteobacteria
TGG
Pro
>WENV182556034
OJDF01005187
178473
Gammaproteobacteria
TGG
Pro
>WENV182555989
OJDF01000129
280812
Gammaproteobacteria
GAA
Phe
>WENV182555979
OJDF01000001
306288
Gammaproteobacteria
GCC
Gly
>WENV182556022
OJDF01004141
296684
Gammaproteobacteria
GGT
Thr
>WENV182556025
OJDF01004562
283225
Gammaproteobacteria
TGT
Thr
>WENV182556010
OJDF01001386
56623
Gammaproteobacteria
GGA
Ser
>WENV182556005
OJDF01001057
402799
Gammaproteobacteria
TTG
Gln
>WENV182556020
OJDF01003873
285547
Gammaproteobacteria
TTG
Gln
>WENV182556024
OJDF01004562
283224
Gammaproteobacteria
GAA
Phe
>WENV182556026
OJDF01004562
118205
Gammaproteobacteria
GTA
Tyr
>WENV182556003
OJDF01001057
190582
Gammaproteobacteria
CAT
Met
>WENV182556043
OJDF01006625
282893
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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