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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182565527
OJEH01010644
400818
Bacteroidota
TTC
Glu
>WENV182565594
OJEH01016673
400818
Bacteroidota
TTC
Glu
>WENV182565328
OJEH01002499
73133
Bacteroidota
TAA
Leu
>WENV182565187
OJEH01000251
191838
Bacteroidota
CAT
Met
>WENV182565711
OJEH01031208
176863
Bacteroidota
CAT
Met
>WENV182565184
OJEH01000182
402390
Bacteroidota
TTC
Glu
>WENV182565656
OJEH01022624
402390
Bacteroidota
TTC
Glu
>WENV182565344
OJEH01002863
156605
Bacteroidota
GAC
Val
>WENV182565652
OJEH01021596
281336
Bacteroidota
TCC
Gly
>WENV182565263
OJEH01000973
402090
Bacteroidota
TTG
Gln
>WENV182565430
OJEH01004968
23370
Bacteroidota
GGA
Ser
>WENV182565496
OJEH01008055
281190
Bacteroidota
CAT
Met
>WENV182565300
OJEH01001886
281190
Bacteroidota
CAT
Met
>WENV182565400
OJEH01003860
209351
Bacteroidota
CAT
Met
>WENV182565207
OJEH01000404
155786
Bacteroidota
TGG
Pro
>WENV182565386
OJEH01003624
320669
Bacteroidota
GAA
Phe
>WENV182565424
OJEH01004790
336507
Bacteroidota
TCC
Gly
>WENV182565456
OJEH01005908
155808
Bacteroidota
TGG
Pro
>WENV182565486
OJEH01007205
176707
Bacteroidota
TCT
Arg
>WENV182565206
OJEH01000404
74253
Bacteroidota
GCT
Ser
>WENV182565194
OJEH01000291
399285
Bacteroidota
TTC
Glu
>WENV182565320
OJEH01002317
227539
Bacteroidota
GTT
Asn
>WENV182565475
OJEH01006560
336000
Bacteroidota
CAT
Met
>WENV182565626
OJEH01019558
156596
Bacteroidota
TAC
Val
>WENV182565340
OJEH01002812
21872
Bacteroidota
GGA
Ser
>WENV182565571
OJEH01013405
200516
Bacteroidota
CAT
Met
>WENV182565385
OJEH01003619
182371
Bacteroidota
CAT
Met
>WENV182565464
OJEH01006269
402343
Bacteroidota
CCA
Trp
>WENV182565228
OJEH01000569
206043
Bacteroidota
GTC
Asp
>WENV182565513
OJEH01009677
118749
Bacteroidota
GTA
Tyr
>WENV182565662
OJEH01023701
118418
Bacteroidota
TAG
Leu
>WENV182565579
OJEH01014208
436346
Bacteroidota
GGT
Thr
>WENV182565519
OJEH01010043
176817
Bacteroidota
CAT
Met
>WENV182565514
OJEH01009677
289409
Bacteroidota
TCC
Gly
>WENV182565284
OJEH01001522
403841
Bacteroidota
GCC
Gly
>WENV182565737
OJEH01036111
176699
Bacteroidota
GTT
Asn
>WENV182565428
OJEH01004934
177901
Bacteroidota
GTT
Asn
>WENV182565740
OJEH01036976
296664
Bacteroidota
GAA
Phe
>WENV182565158
OJEH01000051
186597
Bacteroidota
GTG
His
>WENV182565691
OJEH01027544
156424
Bacteroidota
TGG
Pro
>WENV182565183
OJEH01000171
156424
Bacteroidota
TGG
Pro
>WENV182565449
OJEH01005547
399343
Bacteroidota
TTC
Glu
>WENV182565611
OJEH01017967
162868
Bacteroidota
TAC
Val
>WENV182565443
OJEH01005366
63365
Bacteroidota
TGA
Ser
>WENV182565178
OJEH01000146
56162
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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