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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182586118
OJHJ01002396
400818
Bacteroidota
TTC
Glu
>WENV182586112
OJHJ01002062
191838
Bacteroidota
CAT
Met
>WENV182586091
OJHJ01001023
402390
Bacteroidota
TTC
Glu
>WENV182586184
OJHJ01014310
120026
Bacteroidota
GTA
Tyr
>WENV182586176
OJHJ01010941
156605
Bacteroidota
GAC
Val
>WENV182586169
OJHJ01009493
402090
Bacteroidota
TTG
Gln
>WENV182586174
OJHJ01010521
303411
Bacteroidota
>WENV182586195
OJHJ01017280
336507
Bacteroidota
TCC
Gly
>WENV182586172
OJHJ01009682
155808
Bacteroidota
TGG
Pro
>WENV182586173
OJHJ01009786
227539
Bacteroidota
GTT
Asn
>WENV182586108
OJHJ01001956
347386
Bacteroidota
CCA
Trp
>WENV182586170
OJHJ01009561
340026
Bacteroidota
CAT
Met
>WENV182586106
OJHJ01001907
284409
Bacteroidota
CAT
Met
>WENV182586143
OJHJ01004053
118418
Bacteroidota
TAG
Leu
>WENV182586155
OJHJ01005732
200485
Bacteroidota
CAT
Met
>WENV182586123
OJHJ01002779
177901
Bacteroidota
GTT
Asn
>WENV182586163
OJHJ01007530
186597
Bacteroidota
GTG
His
>WENV182586158
OJHJ01006038
356216
Bacteroidota
TTT
Lys
>WENV182586144
OJHJ01004213
62756
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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