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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182591761
OJIO01004005
398995
Alphaproteobacteria
CAC
Val
>WENV182591785
OJIO01004859
178510
Alphaproteobacteria
ACG
Arg
>WENV182591874
OJIO01010341
446430
Alphaproteobacteria
CAC
Val
>WENV182591844
OJIO01007480
400848
Alphaproteobacteria
GAC
Val
>WENV182591897
OJIO01012903
143406
Alphaproteobacteria
TAG
Leu
>WENV182591872
OJIO01010228
404592
Alphaproteobacteria
GGT
Thr
>WENV182591828
OJIO01006277
140963
Alphaproteobacteria
>WENV182591981
OJIO01030269
178725
Alphaproteobacteria
GTG
His
>WENV182591732
OJIO01002994
100185
Alphaproteobacteria
GAG
Leu
>WENV182591734
OJIO01003047
399480
Alphaproteobacteria
GAA
Phe
>WENV182591964
OJIO01026558
400384
Alphaproteobacteria
TTC
Glu
>WENV182591827
OJIO01006206
78115
Alphaproteobacteria
GAG
Leu
>WENV182592005
OJIO01039768
29702
Alphaproteobacteria
GGA
Ser
>WENV182591842
OJIO01007377
340918
Alphaproteobacteria
CGT
Thr
>WENV182591813
OJIO01006055
427571
Alphaproteobacteria
GCC
Gly
>WENV182591887
OJIO01011806
179941
Alphaproteobacteria
CAT
Met
>WENV182591950
OJIO01022104
179386
Alphaproteobacteria
TCT
Arg
>WENV182591903
OJIO01014795
176153
Alphaproteobacteria
CAT
Met
>WENV182591982
OJIO01030284
100184
Alphaproteobacteria
CAG
Leu
>WENV182592007
OJIO01040910
29727
Alphaproteobacteria
CGA
Ser
>WENV182591900
OJIO01013406
482561
Alphaproteobacteria
TCC
Gly
>WENV182591888
OJIO01011815
281650
Alphaproteobacteria
CCA
Trp
>WENV182591933
OJIO01019514
400515
Alphaproteobacteria
GAC
Val
>WENV182591860
OJIO01008552
398994
Alphaproteobacteria
GTT
Asn
>WENV182591902
OJIO01014752
179721
Alphaproteobacteria
CCG
Arg
>WENV182592028
OJIO01047459
281676
Alphaproteobacteria
TAC
Val
>WENV182591747
OJIO01003493
178507
Alphaproteobacteria
GTG
His
>WENV182591798
OJIO01005263
283257
Alphaproteobacteria
TTT
Lys
>WENV182591898
OJIO01013267
283257
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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