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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182606488
OJJT01015608
290391
Bacillota
TAC
Val
>WENV182606649
OJJT01035242
290391
Bacillota
TAC
Val
>WENV182606107
OJJT01000890
280428
Bacillota
GAA
Phe
>WENV182606156
OJJT01001192
405357
Bacillota
TTC
Glu
>WENV182606055
OJJT01000608
291579
Bacillota
GAA
Phe
>WENV182605897
OJJT01000116
179917
Bacillota
CAT
Met
>WENV182605965
OJJT01000281
179917
Bacillota
CAT
Met
>WENV182606105
OJJT01000890
280466
Bacillota
TAC
Val
>WENV182606532
OJJT01020962
296941
Bacillota
TGC
Ala
>WENV182606533
OJJT01020962
194260
Bacillota
GAT
Ile
>WENV182606652
OJJT01035441
179563
Bacillota
GAT
Ile
>WENV182606361
OJJT01005918
195149
Bacillota
GTC
Asp
>WENV182606417
OJJT01009028
73664
Bacillota
CAG
Leu
>WENV182606206
OJJT01001704
203929
Bacillota
TCT
Arg
>WENV182606296
OJJT01003742
280427
Bacillota
TAC
Val
>WENV182606295
OJJT01003742
280427
Bacillota
TAC
Val
>WENV182606687
OJJT01042860
284723
Bacillota
TAC
Val
>WENV182606403
OJJT01008166
284723
Bacillota
TAC
Val
>WENV182606169
OJJT01001303
284723
Bacillota
TAC
Val
>WENV182606051
OJJT01000608
284723
Bacillota
TAC
Val
>WENV182605962
OJJT01000281
284723
Bacillota
TAC
Val
>WENV182606496
OJJT01016172
481217
Bacillota
GCA
Cys
>WENV182606331
OJJT01004792
290325
Bacillota
GCC
Gly
>WENV182606137
OJJT01001025
290325
Bacillota
GCC
Gly
>WENV182606108
OJJT01000890
290325
Bacillota
GCC
Gly
>WENV182606054
OJJT01000608
187589
Bacillota
CAT
Met
>WENV182606694
OJJT01044941
179810
Bacillota
TCT
Arg
>WENV182606077
OJJT01000743
179810
Bacillota
TCT
Arg
>WENV182606677
OJJT01041610
284627
Bacillota
GAA
Phe
>WENV182606352
OJJT01005578
284627
Bacillota
GAA
Phe
>WENV182606348
OJJT01005578
294020
Bacillota
TAC
Val
>WENV182605894
OJJT01000116
294020
Bacillota
TAC
Val
>WENV182605777
OJJT01000014
294020
Bacillota
TAC
Val
>WENV182606473
OJJT01014165
294020
Bacillota
TAC
Val
>WENV182606683
OJJT01042425
119278
Bacillota
TAG
Leu
>WENV182606249
OJJT01002637
303718
Bacillota
TGT
Thr
>WENV182606725
OJJT01050722
323864
Bacillota
TGC
Ala
>WENV182606545
OJJT01022223
323864
Bacillota
TGC
Ala
>WENV182606484
OJJT01015171
323864
Bacillota
TGC
Ala
>WENV182606049
OJJT01000603
323864
Bacillota
TGC
Ala
>WENV182606662
OJJT01037141
398857
Bacillota
TTC
Glu
>WENV182606065
OJJT01000690
204381
Bacillota
GAT
Ile
>WENV182606008
OJJT01000488
204381
Bacillota
GAT
Ile
>WENV182605992
OJJT01000387
204381
Bacillota
GAT
Ile
>WENV182606673
OJJT01039478
483485
Bacillota
CCC
Gly
>WENV182606454
OJJT01012368
46643
Bacillota
TGA
Ser
>WENV182606549
OJJT01023242
198522
Bacillota
GAT
Ile
>WENV182606438
OJJT01011671
46835
Bacillota
TAA
Leu
>WENV182606650
OJJT01035242
46835
Bacillota
TAA
Leu
>WENV182606350
OJJT01005578
118669
Bacillota
GTA
Tyr
>WENV182606200
OJJT01001637
175915
Bacillota
GTC
Asp
>WENV182606050
OJJT01000608
175915
Bacillota
GTC
Asp
>WENV182606651
OJJT01035441
294275
Bacillota
TGC
Ala
>WENV182606741
OJJT01057938
280476
Bacillota
TTT
Lys
>WENV182606143
OJJT01001043
280476
Bacillota
TTT
Lys
>WENV182606056
OJJT01000608
280476
Bacillota
TTT
Lys
>WENV182606614
OJJT01030765
398852
Bacillota
CTC
Glu
>WENV182606409
OJJT01008708
398852
Bacillota
CTC
Glu
>WENV182606547
OJJT01022727
309916
Bacillota
TTT
Lys
>WENV182606263
OJJT01002663
201856
Bacillota
GAT
Ile
>WENV182606298
OJJT01003742
280483
Bacillota
GAA
Phe
>WENV182606090
OJJT01000776
298260
Bacillota
GTT
Asn
>WENV182606083
OJJT01000746
298260
Bacillota
GTT
Asn
>WENV182606007
OJJT01000465
285601
Bacillota
TTC
Glu
>WENV182605968
OJJT01000285
285601
Bacillota
TTC
Glu
>WENV182606695
OJJT01044941
175857
Bacillota
GTG
His
>WENV182606251
OJJT01002651
317820
Bacillota
TAC
Val
>WENV182606441
OJJT01011869
317820
Bacillota
TAC
Val
>WENV182606703
OJJT01046615
317820
Bacillota
TAC
Val
>WENV182606140
OJJT01001043
179166
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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