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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182629869
OJKV01000218
283336
Actinomycetota
GGT
Thr
>WENV182629820
OJKV01000030
280978
Actinomycetota
CGT
Thr
>WENV182629913
OJKV01001974
178802
Actinomycetota
TAA
Leu
>WENV182629868
OJKV01000218
118279
Actinomycetota
GTA
Tyr
>WENV182629848
OJKV01000088
180097
Actinomycetota
CAA
Leu
>WENV182629879
OJKV01000408
180084
Actinomycetota
CAT
Met
>WENV182629873
OJKV01000297
284287
Actinomycetota
GAA
Phe
>WENV182629910
OJKV01001519
100162
Actinomycetota
TGA
Ser
>WENV182629909
OJKV01001505
281035
Actinomycetota
GTT
Asn
>WENV182629851
OJKV01000098
280944
Actinomycetota
TTC
Glu
>WENV182629894
OJKV01000667
280740
Actinomycetota
GTG
His
>WENV182629870
OJKV01000218
399203
Actinomycetota
CAT
Met
>WENV182629846
OJKV01000077
345086
Actinomycetota
ACG
Arg
>WENV182629872
OJKV01000297
202982
Actinomycetota
GTC
Asp
>WENV182629803
OJKV01000002
180096
Actinomycetota
GAT
Ile
>WENV182629812
OJKV01000020
284895
Actinomycetota
TCT
Arg
>WENV182629900
OJKV01000833
281146
Actinomycetota
CGC
Ala
>WENV182629882
OJKV01000440
178580
Actinomycetota
GAA
Phe
>WENV182629829
OJKV01000039
117851
Actinomycetota
GTA
Tyr
>WENV182629855
OJKV01000103
176352
Actinomycetota
GGG
Pro
>WENV182629920
OJKV01003097
403867
Actinomycetota
CTG
Gln
>WENV182629884
OJKV01000453
400674
Actinomycetota
CTG
Gln
>WENV182629890
OJKV01000631
187433
Actinomycetota
CCG
Arg
>WENV182629895
OJKV01000667
280982
Actinomycetota
CTT
Lys
>WENV182629804
OJKV01000002
312253
Actinomycetota
TGC
Ala
>WENV182629805
OJKV01000002
312253
Actinomycetota
TGC
Ala
>WENV182629901
OJKV01000877
46790
Actinomycetota
GAG
Leu
>WENV182629886
OJKV01000500
499385
Actinomycetota
CCC
Gly
>WENV182629865
OJKV01000203
399099
Actinomycetota
>WENV182629881
OJKV01000440
178579
Actinomycetota
GTC
Asp
>WENV182629860
OJKV01000173
46893
Actinomycetota
GAG
Leu
>WENV182629831
OJKV01000039
399188
Actinomycetota
CAT
Met
>WENV182629840
OJKV01000071
406233
Actinomycetota
CAC
Val
>WENV182629813
OJKV01000020
293157
Actinomycetota
GTG
His
>WENV182629904
OJKV01001218
337841
Actinomycetota
CTC
Glu
>WENV182629825
OJKV01000033
481452
Actinomycetota
CCC
Gly
>WENV182629808
OJKV01000011
214183
Actinomycetota
CGG
Pro
>WENV182629891
OJKV01000653
284288
Actinomycetota
TAC
Val
>WENV182629861
OJKV01000177
284289
Actinomycetota
CCT
Arg
>WENV182629916
OJKV01002702
100161
Actinomycetota
CAG
Leu
>WENV182629893
OJKV01000656
47028
Actinomycetota
GGA
Ser
>WENV182629922
OJKV01003207
56387
Actinomycetota
CGA
Ser
>WENV182629839
OJKV01000061
120845
Actinomycetota
TAG
Leu
>WENV182629807
OJKV01000008
197533
Actinomycetota
CAT
Met
>WENV182629822
OJKV01000031
280979
Actinomycetota
GGT
Thr
>WENV182629830
OJKV01000039
280979
Actinomycetota
GGT
Thr
>WENV182629852
OJKV01000098
202703
Actinomycetota
GTC
Asp
>WENV182629811
OJKV01000015
421837
Actinomycetota
TCC
Gly
>WENV182629925
OJKV01004486
406385
Actinomycetota
CAC
Val
>WENV182629843
OJKV01000073
176317
Actinomycetota
GAT
Ile
>WENV182629859
OJKV01000164
180067
Actinomycetota
TAA
Leu
>WENV182629883
OJKV01000440
178582
Actinomycetota
TTT
Lys
>WENV182629939
OJKV01060347
283322
Actinomycetota
CGT
Thr
>WENV182629824
OJKV01000031
284899
Actinomycetota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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