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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182673165
OJNO01000848
99852
Bacillota
GTA
Tyr
>WENV182673430
OJNO01013560
280870
Bacillota
TGC
Ala
>WENV182673506
OJNO01023289
280500
Bacillota
TGC
Ala
>WENV182673163
OJNO01000848
349107
Bacillota
GCC
Gly
>WENV182673373
OJNO01007954
480520
Bacillota
TCC
Gly
>WENV182673164
OJNO01000848
405363
Bacillota
GCA
Cys
>WENV182673044
OJNO01000239
290391
Bacillota
TAC
Val
>WENV182673314
OJNO01004547
302145
Bacillota
GAA
Phe
>WENV182673210
OJNO01001457
175842
Bacillota
CAC
Val
>WENV182673306
OJNO01004257
348419
Bacillota
GTT
Asn
>WENV182673572
OJNO01039511
184497
Bacillota
GGG
Pro
>WENV182673471
OJNO01018638
282752
Bacillota
TTT
Lys
>WENV182673382
OJNO01008122
46686
Bacillota
TAA
Leu
>WENV182672886
OJNO01000009
73664
Bacillota
CAG
Leu
>WENV182673250
OJNO01002413
280447
Bacillota
GAC
Val
>WENV182673217
OJNO01001560
280447
Bacillota
GAC
Val
>WENV182673554
OJNO01031588
175825
Bacillota
GAT
Ile
>WENV182673375
OJNO01007954
291558
Bacillota
CTT
Lys
>WENV182673232
OJNO01001830
73009
Bacillota
CAG
Leu
>WENV182673444
OJNO01015275
481217
Bacillota
GCA
Cys
>WENV182673483
OJNO01019560
399266
Bacillota
>WENV182673300
OJNO01004112
407726
Bacillota
CTG
Gln
>WENV182673191
OJNO01001226
175859
Bacillota
TCT
Arg
>WENV182673553
OJNO01031588
280436
Bacillota
TGC
Ala
>WENV182673472
OJNO01018778
175831
Bacillota
ACG
Arg
>WENV182673402
OJNO01009529
284627
Bacillota
GAA
Phe
>WENV182673399
OJNO01009070
480322
Bacillota
CTG
Gln
>WENV182673128
OJNO01000616
480322
Bacillota
CTG
Gln
>WENV182673302
OJNO01004150
401685
Bacillota
TTG
Gln
>WENV182673462
OJNO01017181
141533
Bacillota
CAA
Leu
>WENV182673122
OJNO01000529
175868
Bacillota
GTT
Asn
>WENV182673396
OJNO01008916
322848
Bacillota
CTT
Lys
>WENV182673166
OJNO01000865
291576
Bacillota
CCC
Gly
>WENV182673169
OJNO01000928
480324
Bacillota
TTG
Gln
>WENV182673296
OJNO01003617
497729
Bacillota
CCA
Trp
>WENV182673043
OJNO01000239
180688
Bacillota
GTC
Asp
>WENV182673359
OJNO01007036
323864
Bacillota
TGC
Ala
>WENV182673374
OJNO01007954
182384
Bacillota
TCT
Arg
>WENV182673418
OJNO01011479
398857
Bacillota
TTC
Glu
>WENV182673285
OJNO01003196
280444
Bacillota
GGT
Thr
>WENV182673267
OJNO01002788
179755
Bacillota
CCG
Arg
>WENV182673255
OJNO01002505
179755
Bacillota
CCG
Arg
>WENV182673193
OJNO01001246
179755
Bacillota
CCG
Arg
>WENV182673409
OJNO01010116
344985
Bacillota
GAA
Phe
>WENV182673395
OJNO01008793
46835
Bacillota
TAA
Leu
>WENV182672994
OJNO01000154
118669
Bacillota
GTA
Tyr
>WENV182673410
OJNO01010116
484342
Bacillota
GCA
Cys
>WENV182673085
OJNO01000308
280476
Bacillota
TTT
Lys
>WENV182672873
OJNO01000001
398852
Bacillota
CTC
Glu
>WENV182672872
OJNO01000001
398852
Bacillota
CTC
Glu
>WENV182672871
OJNO01000001
398852
Bacillota
CTC
Glu
>WENV182673147
OJNO01000752
321248
Bacillota
TAC
Val
>WENV182673301
OJNO01004150
175857
Bacillota
GTG
His
>WENV182673249
OJNO01002394
398833
Bacillota
TGT
Thr
>WENV182673245
OJNO01002277
398833
Bacillota
TGT
Thr
>WENV182673182
OJNO01001142
398833
Bacillota
TGT
Thr
>WENV182673162
OJNO01000848
175849
Bacillota
GTC
Asp
>WENV182673372
OJNO01007954
328987
Bacillota
TGG
Pro
>WENV182673168
OJNO01000920
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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