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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182736664
OJQH01007069
99852
Bacillota
GTA
Tyr
>WENV182736765
OJQH01014403
280500
Bacillota
TGC
Ala
>WENV182736529
OJQH01002614
405363
Bacillota
GCA
Cys
>WENV182736547
OJQH01002894
280428
Bacillota
GAA
Phe
>WENV182736612
OJQH01004654
291579
Bacillota
GAA
Phe
>WENV182736783
OJQH01016846
179917
Bacillota
CAT
Met
>WENV182736322
OJQH01000740
280492
Bacillota
CTT
Lys
>WENV182736350
OJQH01000940
175842
Bacillota
CAC
Val
>WENV182736577
OJQH01003325
184497
Bacillota
GGG
Pro
>WENV182736803
OJQH01020147
222982
Bacillota
CAT
Met
>WENV182736443
OJQH01001577
179176
Bacillota
ACG
Arg
>WENV182736564
OJQH01003056
406553
Bacillota
TTG
Gln
>WENV182736655
OJQH01006678
295166
Bacillota
TGC
Ala
>WENV182736475
OJQH01002002
190476
Bacillota
CAT
Met
>WENV182736247
OJQH01000396
190476
Bacillota
CAT
Met
>WENV182736357
OJQH01000982
280447
Bacillota
GAC
Val
>WENV182736255
OJQH01000415
280447
Bacillota
GAC
Val
>WENV182736130
OJQH01000129
5692
Bacillota
GCT
Ser
>WENV182736838
OJQH01024450
175825
Bacillota
GAT
Ile
>WENV182736624
OJQH01005057
73009
Bacillota
CAG
Leu
>WENV182736063
OJQH01000050
73009
Bacillota
CAG
Leu
>WENV182736344
OJQH01000874
189473
Bacillota
GAT
Ile
>WENV182736611
OJQH01004644
291581
Bacillota
CGG
Pro
>WENV182736298
OJQH01000578
175859
Bacillota
TCT
Arg
>WENV182736837
OJQH01024450
280436
Bacillota
TGC
Ala
>WENV182736685
OJQH01008402
175831
Bacillota
ACG
Arg
>WENV182736764
OJQH01014403
175916
Bacillota
GAT
Ile
>WENV182736272
OJQH01000511
480322
Bacillota
CTG
Gln
>WENV182736858
OJQH01026986
401685
Bacillota
TTG
Gln
>WENV182736226
OJQH01000343
175868
Bacillota
GTT
Asn
>WENV182736090
OJQH01000075
175868
Bacillota
GTT
Asn
>WENV182736553
OJQH01002983
322848
Bacillota
CTT
Lys
>WENV182736225
OJQH01000343
398854
Bacillota
CTC
Glu
>WENV182736249
OJQH01000398
291576
Bacillota
CCC
Gly
>WENV182736271
OJQH01000505
480324
Bacillota
TTG
Gln
>WENV182736635
OJQH01006017
303718
Bacillota
TGT
Thr
>WENV182736181
OJQH01000244
303718
Bacillota
TGT
Thr
>WENV182736643
OJQH01006393
56079
Bacillota
AAG
Leu
>WENV182736193
OJQH01000262
280444
Bacillota
GGT
Thr
>WENV182736192
OJQH01000262
280444
Bacillota
GGT
Thr
>WENV182736633
OJQH01005794
317482
Bacillota
TAC
Val
>WENV182736397
OJQH01001275
179755
Bacillota
CCG
Arg
>WENV182736476
OJQH01002002
398832
Bacillota
TTC
Glu
>WENV182736248
OJQH01000396
398832
Bacillota
TTC
Glu
>WENV182736569
OJQH01003186
280462
Bacillota
GAA
Phe
>WENV182736444
OJQH01001593
398852
Bacillota
CTC
Glu
>WENV182736346
OJQH01000886
398852
Bacillota
CTC
Glu
>WENV182736599
OJQH01004031
309916
Bacillota
TTT
Lys
>WENV182736146
OJQH01000160
280483
Bacillota
GAA
Phe
>WENV182736857
OJQH01026986
175857
Bacillota
GTG
His
>WENV182736147
OJQH01000160
285756
Bacillota
GCC
Gly
>WENV182736002
OJQH01000010
285756
Bacillota
GCC
Gly
>WENV182736347
OJQH01000906
398833
Bacillota
TGT
Thr
>WENV182736191
OJQH01000262
175849
Bacillota
GTC
Asp
>WENV182736129
OJQH01000129
56074
Bacillota
TGA
Ser
>WENV182736445
OJQH01001600
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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