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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182758884
OJRI01038830
99852
Bacillota
GTA
Tyr
>WENV182758606
OJRI01008767
280500
Bacillota
TGC
Ala
>WENV182758845
OJRI01031891
405363
Bacillota
GCA
Cys
>WENV182758667
OJRI01011565
280428
Bacillota
GAA
Phe
>WENV182758567
OJRI01007325
291579
Bacillota
GAA
Phe
>WENV182758566
OJRI01007325
179917
Bacillota
CAT
Met
>WENV182758169
OJRI01000410
280492
Bacillota
CTT
Lys
>WENV182758086
OJRI01000164
280492
Bacillota
CTT
Lys
>WENV182758682
OJRI01013038
175842
Bacillota
CAC
Val
>WENV182758753
OJRI01019200
407852
Bacillota
TTC
Glu
>WENV182758748
OJRI01018215
179563
Bacillota
GAT
Ile
>WENV182758747
OJRI01018215
295166
Bacillota
TGC
Ala
>WENV182758503
OJRI01004317
190476
Bacillota
CAT
Met
>WENV182758090
OJRI01000167
73664
Bacillota
CAG
Leu
>WENV182758655
OJRI01011220
280447
Bacillota
GAC
Val
>WENV182758530
OJRI01005628
5692
Bacillota
GCT
Ser
>WENV182758266
OJRI01000813
284723
Bacillota
TAC
Val
>WENV182758847
OJRI01032615
73009
Bacillota
CAG
Leu
>WENV182758576
OJRI01007762
189473
Bacillota
GAT
Ile
>WENV182758625
OJRI01009144
291581
Bacillota
CGG
Pro
>WENV182758895
OJRI01040684
175859
Bacillota
TCT
Arg
>WENV182758798
OJRI01023264
175859
Bacillota
TCT
Arg
>WENV182758652
OJRI01011174
280436
Bacillota
TGC
Ala
>WENV182758631
OJRI01009574
175831
Bacillota
ACG
Arg
>WENV182758790
OJRI01021507
184121
Bacillota
TGG
Pro
>WENV182758487
OJRI01003814
187390
Bacillota
CGG
Pro
>WENV182758624
OJRI01009144
480322
Bacillota
CTG
Gln
>WENV182758769
OJRI01020734
282867
Bacillota
TGT
Thr
>WENV182758517
OJRI01004786
175868
Bacillota
GTT
Asn
>WENV182758516
OJRI01004786
398854
Bacillota
CTC
Glu
>WENV182758813
OJRI01025887
291576
Bacillota
CCC
Gly
>WENV182758626
OJRI01009199
480324
Bacillota
TTG
Gln
>WENV182758089
OJRI01000167
56079
Bacillota
AAG
Leu
>WENV182758088
OJRI01000167
56079
Bacillota
AAG
Leu
>WENV182758879
OJRI01038626
186051
Bacillota
GAT
Ile
>WENV182758615
OJRI01008892
186051
Bacillota
GAT
Ile
>WENV182758357
OJRI01001427
117745
Bacillota
GTA
Tyr
>WENV182758639
OJRI01010410
280444
Bacillota
GGT
Thr
>WENV182758297
OJRI01001016
46643
Bacillota
TGA
Ser
>WENV182758473
OJRI01003322
179755
Bacillota
CCG
Arg
>WENV182758504
OJRI01004317
398832
Bacillota
TTC
Glu
>WENV182758074
OJRI01000151
280462
Bacillota
GAA
Phe
>WENV182758608
OJRI01008801
398852
Bacillota
CTC
Glu
>WENV182758387
OJRI01001812
398852
Bacillota
CTC
Glu
>WENV182758131
OJRI01000289
398852
Bacillota
CTC
Glu
>WENV182758685
OJRI01013471
280483
Bacillota
GAA
Phe
>WENV182758686
OJRI01013471
285756
Bacillota
GCC
Gly
>WENV182758970
OJRI01061837
398833
Bacillota
TGT
Thr
>WENV182758638
OJRI01010410
175849
Bacillota
GTC
Asp
>WENV182758075
OJRI01000151
280463
Bacillota
TTT
Lys
>WENV182758529
OJRI01005628
56074
Bacillota
TGA
Ser
>WENV182758594
OJRI01008299
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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