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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182787927
OJSK01002989
56083
Actinomycetota
CGA
Ser
>WENV182788070
OJSK01006642
176075
Actinomycetota
TCT
Arg
>WENV182788154
OJSK01011185
175848
Actinomycetota
TGG
Pro
>WENV182787952
OJSK01003514
59689
Actinomycetota
GGA
Ser
>WENV182788174
OJSK01011707
175837
Actinomycetota
ACG
Arg
>WENV182787926
OJSK01002903
29393
Actinomycetota
GCT
Ser
>WENV182788099
OJSK01007688
280549
Actinomycetota
CAC
Val
>WENV182788081
OJSK01007030
349164
Actinomycetota
CTC
Glu
>WENV182788022
OJSK01004972
280702
Actinomycetota
GGC
Ala
>WENV182788076
OJSK01006850
176077
Actinomycetota
CAT
Met
>WENV182788281
OJSK01023316
76168
Actinomycetota
CAG
Leu
>WENV182788218
OJSK01015427
21508
Actinomycetota
GAG
Leu
>WENV182788270
OJSK01022031
241064
Actinomycetota
CTC
Glu
>WENV182788296
OJSK01025782
280524
Actinomycetota
TGC
Ala
>WENV182788201
OJSK01013672
398948
Actinomycetota
TTC
Glu
>WENV182788108
OJSK01008223
150272
Actinomycetota
TAA
Leu
>WENV182788194
OJSK01013350
117777
Actinomycetota
>WENV182788195
OJSK01013350
175949
Actinomycetota
CAT
Met
>WENV182788131
OJSK01009289
191955
Actinomycetota
TGT
Thr
>WENV182788071
OJSK01006649
280544
Actinomycetota
GTG
His
>WENV182788152
OJSK01011079
280496
Actinomycetota
CGT
Thr
>WENV182788042
OJSK01005655
280703
Actinomycetota
CCT
Arg
>WENV182788133
OJSK01009472
358727
Actinomycetota
CCG
Arg
>WENV182788127
OJSK01009080
99865
Actinomycetota
CAG
Leu
>WENV182788250
OJSK01019547
222475
Actinomycetota
CTT
Lys
>WENV182788082
OJSK01007030
398853
Actinomycetota
CTG
Gln
>WENV182788161
OJSK01011380
175843
Actinomycetota
CAA
Leu
>WENV182787984
OJSK01004303
56075
Actinomycetota
TGA
Ser
>WENV182788295
OJSK01025782
179238
Actinomycetota
GAT
Ile
>WENV182788226
OJSK01016594
506175
Actinomycetota
TTG
Gln
>WENV182788275
OJSK01022723
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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