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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182792745
OJSO01006664
99852
Bacillota
GTA
Tyr
>WENV182792867
OJSO01014060
343590
Bacillota
GCC
Gly
>WENV182792712
OJSO01005476
405363
Bacillota
GCA
Cys
>WENV182792708
OJSO01005390
289472
Bacillota
TTC
Glu
>WENV182793065
OJSO01051502
424998
Bacillota
GCC
Gly
>WENV182792907
OJSO01019040
179917
Bacillota
CAT
Met
>WENV182792743
OJSO01006445
280492
Bacillota
CTT
Lys
>WENV182793046
OJSO01044520
231532
Bacillota
ACG
Arg
>WENV182792809
OJSO01009527
175842
Bacillota
CAC
Val
>WENV182793052
OJSO01047230
184497
Bacillota
GGG
Pro
>WENV182792554
OJSO01001892
190476
Bacillota
CAT
Met
>WENV182792920
OJSO01021050
184522
Bacillota
CCT
Arg
>WENV182792751
OJSO01007074
73664
Bacillota
CAG
Leu
>WENV182792590
OJSO01002337
5692
Bacillota
GCT
Ser
>WENV182792709
OJSO01005390
359682
Bacillota
TAC
Val
>WENV182792684
OJSO01004603
73009
Bacillota
CAG
Leu
>WENV182792529
OJSO01001754
175859
Bacillota
TCT
Arg
>WENV182792275
OJSO01000337
290325
Bacillota
GCC
Gly
>WENV182792565
OJSO01002133
175831
Bacillota
ACG
Arg
>WENV182792931
OJSO01022201
47166
Bacillota
CGA
Ser
>WENV182793066
OJSO01051502
289147
Bacillota
GTT
Asn
>WENV182792823
OJSO01010986
289475
Bacillota
GTG
His
>WENV182792446
OJSO01001192
480322
Bacillota
CTG
Gln
>WENV182792504
OJSO01001573
175868
Bacillota
GTT
Asn
>WENV182792939
OJSO01023157
200900
Bacillota
TGG
Pro
>WENV182793063
OJSO01050341
120584
Bacillota
GTA
Tyr
>WENV182792976
OJSO01029287
289476
Bacillota
CGT
Thr
>WENV182792727
OJSO01005867
398854
Bacillota
CTC
Glu
>WENV182792721
OJSO01005731
291576
Bacillota
CCC
Gly
>WENV182792801
OJSO01009061
480324
Bacillota
TTG
Gln
>WENV182792993
OJSO01034282
497729
Bacillota
CCA
Trp
>WENV182792984
OJSO01031427
175899
Bacillota
GTC
Asp
>WENV182792264
OJSO01000308
303718
Bacillota
TGT
Thr
>WENV182792570
OJSO01002162
56079
Bacillota
AAG
Leu
>WENV182792827
OJSO01011291
323864
Bacillota
TGC
Ala
>WENV182792882
OJSO01015462
175911
Bacillota
GTC
Asp
>WENV182793021
OJSO01038095
292374
Bacillota
TGC
Ala
>WENV182793067
OJSO01051502
403952
Bacillota
CTG
Gln
>WENV182792653
OJSO01003746
117745
Bacillota
GTA
Tyr
>WENV182792520
OJSO01001665
280444
Bacillota
GGT
Thr
>WENV182792516
OJSO01001665
280444
Bacillota
GGT
Thr
>WENV182792762
OJSO01007400
179755
Bacillota
CCG
Arg
>WENV182792643
OJSO01003555
179755
Bacillota
CCG
Arg
>WENV182792562
OJSO01002042
179755
Bacillota
CCG
Arg
>WENV182792959
OJSO01025241
401111
Bacillota
TTC
Glu
>WENV182792851
OJSO01012797
289154
Bacillota
CTT
Lys
>WENV182792846
OJSO01012643
46835
Bacillota
TAA
Leu
>WENV182792555
OJSO01001892
398832
Bacillota
TTC
Glu
>WENV182792180
OJSO01000110
398832
Bacillota
TTC
Glu
>WENV182792674
OJSO01004208
25955
Bacillota
GCT
Ser
>WENV182792677
OJSO01004279
118669
Bacillota
GTA
Tyr
>WENV182792573
OJSO01002214
280462
Bacillota
GAA
Phe
>WENV182792494
OJSO01001552
398852
Bacillota
CTC
Glu
>WENV182792161
OJSO01000080
118359
Bacillota
GTA
Tyr
>WENV182792499
OJSO01001568
175857
Bacillota
GTG
His
>WENV182792807
OJSO01009301
398833
Bacillota
TGT
Thr
>WENV182793035
OJSO01041319
516671
Bacillota
TCC
Gly
>WENV182792519
OJSO01001665
175849
Bacillota
GTC
Asp
>WENV182792574
OJSO01002214
280463
Bacillota
TTT
Lys
>WENV182792501
OJSO01001568
280463
Bacillota
TTT
Lys
>WENV182792589
OJSO01002337
56074
Bacillota
TGA
Ser
>WENV182792878
OJSO01014788
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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