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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
128 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182802201
OJUG01006538
99852
Bacillota
GTA
Tyr
>WENV182802666
OJUG01032257
280870
Bacillota
TGC
Ala
>WENV182801656
OJUG01001571
343590
Bacillota
GCC
Gly
>WENV182802841
OJUG01069136
280500
Bacillota
TGC
Ala
>WENV182801401
OJUG01000733
349107
Bacillota
GCC
Gly
>WENV182801419
OJUG01000749
349107
Bacillota
GCC
Gly
>WENV182802301
OJUG01008765
405363
Bacillota
GCA
Cys
>WENV182801128
OJUG01000268
289472
Bacillota
TTC
Glu
>WENV182802315
OJUG01009108
290391
Bacillota
TAC
Val
>WENV182801400
OJUG01000733
280428
Bacillota
GAA
Phe
>WENV182802887
OJUG01088286
283881
Bacillota
TGC
Ala
>WENV182801485
OJUG01000920
424998
Bacillota
GCC
Gly
>WENV182801873
OJUG01002591
284746
Bacillota
CTG
Gln
>WENV182801194
OJUG01000349
183994
Bacillota
TCT
Arg
>WENV182801469
OJUG01000874
280492
Bacillota
CTT
Lys
>WENV182800871
OJUG01000039
280492
Bacillota
CTT
Lys
>WENV182801861
OJUG01002532
231532
Bacillota
ACG
Arg
>WENV182802151
OJUG01005553
175842
Bacillota
CAC
Val
>WENV182802482
OJUG01014815
348419
Bacillota
GTT
Asn
>WENV182802392
OJUG01011430
184497
Bacillota
GGG
Pro
>WENV182801983
OJUG01003478
179176
Bacillota
ACG
Arg
>WENV182801012
OJUG01000137
179176
Bacillota
ACG
Arg
>WENV182802477
OJUG01014631
406553
Bacillota
TTG
Gln
>WENV182801132
OJUG01000268
101000
Bacillota
GTA
Tyr
>WENV182802259
OJUG01007342
190476
Bacillota
CAT
Met
>WENV182801683
OJUG01001644
190476
Bacillota
CAT
Met
>WENV182801130
OJUG01000268
184522
Bacillota
CCT
Arg
>WENV182801371
OJUG01000682
73664
Bacillota
CAG
Leu
>WENV182801178
OJUG01000332
73664
Bacillota
CAG
Leu
>WENV182802403
OJUG01011803
280447
Bacillota
GAC
Val
>WENV182801738
OJUG01001863
280447
Bacillota
GAC
Val
>WENV182802168
OJUG01005821
5692
Bacillota
GCT
Ser
>WENV182802037
OJUG01004083
5692
Bacillota
GCT
Ser
>WENV182801525
OJUG01001049
47207
Bacillota
TGA
Ser
>WENV182802129
OJUG01005161
359682
Bacillota
TAC
Val
>WENV182801129
OJUG01000268
359682
Bacillota
TAC
Val
>WENV182802230
OJUG01006981
73009
Bacillota
CAG
Leu
>WENV182802153
OJUG01005605
73009
Bacillota
CAG
Leu
>WENV182801825
OJUG01002357
481217
Bacillota
GCA
Cys
>WENV182802868
OJUG01079184
491377
Bacillota
GCA
Cys
>WENV182801135
OJUG01000268
183993
Bacillota
CAT
Met
>WENV182802179
OJUG01006021
291581
Bacillota
CGG
Pro
>WENV182802382
OJUG01011181
175859
Bacillota
TCT
Arg
>WENV182802090
OJUG01004663
175859
Bacillota
TCT
Arg
>WENV182802377
OJUG01011027
398835
Bacillota
GCC
Gly
>WENV182801134
OJUG01000268
289149
Bacillota
GGT
Thr
>WENV182801347
OJUG01000633
290325
Bacillota
GCC
Gly
>WENV182802601
OJUG01022212
175831
Bacillota
ACG
Arg
>WENV182802199
OJUG01006519
175831
Bacillota
ACG
Arg
>WENV182802524
OJUG01017062
187589
Bacillota
CAT
Met
>WENV182801441
OJUG01000803
47166
Bacillota
CGA
Ser
>WENV182802101
OJUG01004785
284627
Bacillota
GAA
Phe
>WENV182801598
OJUG01001261
284627
Bacillota
GAA
Phe
>WENV182801652
OJUG01001548
289475
Bacillota
GTG
His
>WENV182802032
OJUG01004048
241041
Bacillota
CGG
Pro
>WENV182801364
OJUG01000659
293309
Bacillota
GTT
Asn
>WENV182801651
OJUG01001548
20913
Bacillota
GCT
Ser
>WENV182801306
OJUG01000539
484885
Bacillota
TCC
Gly
>WENV182802389
OJUG01011302
480322
Bacillota
CTG
Gln
>WENV182802178
OJUG01006021
480322
Bacillota
CTG
Gln
>WENV182801868
OJUG01002572
480322
Bacillota
CTG
Gln
>WENV182802044
OJUG01004167
175868
Bacillota
GTT
Asn
>WENV182802466
OJUG01014309
175868
Bacillota
GTT
Asn
>WENV182801192
OJUG01000349
200900
Bacillota
TGG
Pro
>WENV182801281
OJUG01000500
184455
Bacillota
GTC
Asp
>WENV182801242
OJUG01000432
289476
Bacillota
CGT
Thr
>WENV182802083
OJUG01004546
322848
Bacillota
CTT
Lys
>WENV182801487
OJUG01000920
48832
Bacillota
TAA
Leu
>WENV182802465
OJUG01014309
398854
Bacillota
CTC
Glu
>WENV182802470
OJUG01014404
291576
Bacillota
CCC
Gly
>WENV182802427
OJUG01012433
291576
Bacillota
CCC
Gly
>WENV182802501
OJUG01015873
287280
Bacillota
TGT
Thr
>WENV182802284
OJUG01008153
480324
Bacillota
TTG
Gln
>WENV182802007
OJUG01003806
480324
Bacillota
TTG
Gln
>WENV182802087
OJUG01004624
497729
Bacillota
CCA
Trp
>WENV182801756
OJUG01001963
497729
Bacillota
CCA
Trp
>WENV182802412
OJUG01012000
303718
Bacillota
TGT
Thr
>WENV182801882
OJUG01002661
303718
Bacillota
TGT
Thr
>WENV182801736
OJUG01001860
303718
Bacillota
TGT
Thr
>WENV182801263
OJUG01000470
303718
Bacillota
TGT
Thr
>WENV182801290
OJUG01000522
56079
Bacillota
AAG
Leu
>WENV182801177
OJUG01000332
56079
Bacillota
AAG
Leu
>WENV182802372
OJUG01010855
175911
Bacillota
GTC
Asp
>WENV182802127
OJUG01005161
179935
Bacillota
GTC
Asp
>WENV182802681
OJUG01034644
186051
Bacillota
GAT
Ile
>WENV182802481
OJUG01014815
398857
Bacillota
TTC
Glu
>WENV182801463
OJUG01000847
117745
Bacillota
GTA
Tyr
>WENV182802422
OJUG01012238
280444
Bacillota
GGT
Thr
>WENV182801283
OJUG01000500
100999
Bacillota
GAG
Leu
>WENV182802223
OJUG01006864
179755
Bacillota
CCG
Arg
>WENV182801474
OJUG01000885
179755
Bacillota
CCG
Arg
>WENV182801933
OJUG01002965
401111
Bacillota
TTC
Glu
>WENV182802531
OJUG01017571
58120
Bacillota
AAG
Leu
>WENV182801961
OJUG01003299
58120
Bacillota
AAG
Leu
>WENV182801751
OJUG01001944
289154
Bacillota
CTT
Lys
>WENV182801802
OJUG01002228
46835
Bacillota
TAA
Leu
>WENV182802128
OJUG01005161
284742
Bacillota
GAA
Phe
>WENV182802260
OJUG01007342
398832
Bacillota
TTC
Glu
>WENV182801684
OJUG01001644
398832
Bacillota
TTC
Glu
>WENV182801359
OJUG01000656
398832
Bacillota
TTC
Glu
>WENV182801244
OJUG01000440
25955
Bacillota
GCT
Ser
>WENV182802789
OJUG01055110
449573
Bacillota
>WENV182800923
OJUG01000077
118669
Bacillota
GTA
Tyr
>WENV182802783
OJUG01054088
294275
Bacillota
TGC
Ala
>WENV182802057
OJUG01004252
280476
Bacillota
TTT
Lys
>WENV182801109
OJUG01000242
280462
Bacillota
GAA
Phe
>WENV182801464
OJUG01000847
398852
Bacillota
CTC
Glu
>WENV182801118
OJUG01000253
398852
Bacillota
CTC
Glu
>WENV182801117
OJUG01000253
398852
Bacillota
CTC
Glu
>WENV182801116
OJUG01000253
398852
Bacillota
CTC
Glu
>WENV182801114
OJUG01000249
398852
Bacillota
CTC
Glu
>WENV182800953
OJUG01000084
398852
Bacillota
CTC
Glu
>WENV182801195
OJUG01000349
404085
Bacillota
CCG
Arg
>WENV182801746
OJUG01001912
118359
Bacillota
GTA
Tyr
>WENV182802752
OJUG01046398
201856
Bacillota
GAT
Ile
>WENV182801158
OJUG01000308
183995
Bacillota
GGG
Pro
>WENV182801308
OJUG01000539
175857
Bacillota
GTG
His
>WENV182802435
OJUG01012883
175857
Bacillota
GTG
His
>WENV182802468
OJUG01014371
398833
Bacillota
TGT
Thr
>WENV182801653
OJUG01001548
403766
Bacillota
TTG
Gln
>WENV182801110
OJUG01000242
280463
Bacillota
TTT
Lys
>WENV182801486
OJUG01000920
489283
Bacillota
GCA
Cys
>WENV182802167
OJUG01005821
56074
Bacillota
TGA
Ser
>WENV182802036
OJUG01004083
56074
Bacillota
TGA
Ser
>WENV182802471
OJUG01014492
280473
Bacillota
TGG
Pro
>WENV182802469
OJUG01014390
280473
Bacillota
TGG
Pro
>WENV182802326
OJUG01009363
280473
Bacillota
TGG
Pro
>WENV182802181
OJUG01006046
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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