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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182812174
OJXQ01000980
280978
Actinomycetota
CGT
Thr
>WENV182812157
OJXQ01000228
180097
Actinomycetota
CAA
Leu
>WENV182812180
OJXQ01001699
281035
Actinomycetota
GTT
Asn
>WENV182812167
OJXQ01000504
336201
Actinomycetota
TGT
Thr
>WENV182812139
OJXQ01000017
180096
Actinomycetota
GAT
Ile
>WENV182812161
OJXQ01000378
117851
Actinomycetota
GTA
Tyr
>WENV182812179
OJXQ01001540
176352
Actinomycetota
GGG
Pro
>WENV182812182
OJXQ01002752
187433
Actinomycetota
CCG
Arg
>WENV182812169
OJXQ01000520
280982
Actinomycetota
CTT
Lys
>WENV182812168
OJXQ01000520
370866
Actinomycetota
GTG
His
>WENV182812140
OJXQ01000017
312253
Actinomycetota
TGC
Ala
>WENV182812186
OJXQ01003165
459167
Actinomycetota
TCC
Gly
>WENV182812172
OJXQ01000711
46893
Actinomycetota
GAG
Leu
>WENV182812188
OJXQ01003177
399188
Actinomycetota
CAT
Met
>WENV182812175
OJXQ01001135
406233
Actinomycetota
CAC
Val
>WENV182812178
OJXQ01001321
481452
Actinomycetota
CCC
Gly
>WENV182812170
OJXQ01000537
47028
Actinomycetota
GGA
Ser
>WENV182812171
OJXQ01000553
197533
Actinomycetota
CAT
Met
>WENV182812187
OJXQ01003177
280979
Actinomycetota
GGT
Thr
>WENV182812156
OJXQ01000176
180067
Actinomycetota
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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