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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182817465
OJZM01000009
178658
Actinomycetota
CAA
Leu
>WENV182817726
OJZM01000365
283336
Actinomycetota
GGT
Thr
>WENV182817654
OJZM01000190
176499
Actinomycetota
CAT
Met
>WENV182817758
OJZM01000490
280498
Actinomycetota
GTT
Asn
>WENV182817612
OJZM01000138
178581
Actinomycetota
TAC
Val
>WENV182817903
OJZM01001544
459899
Actinomycetota
TTC
Glu
>WENV182817473
OJZM01000012
140768
Actinomycetota
TAG
Leu
>WENV182817587
OJZM01000095
400421
Actinomycetota
GAC
Val
>WENV182817531
OJZM01000058
100162
Actinomycetota
TGA
Ser
>WENV182817464
OJZM01000009
175837
Actinomycetota
ACG
Arg
>WENV182817737
OJZM01000410
150281
Actinomycetota
TTG
Gln
>WENV182817611
OJZM01000138
283331
Actinomycetota
CTC
Glu
>WENV182817727
OJZM01000365
399203
Actinomycetota
CAT
Met
>WENV182817501
OJZM01000041
283323
Actinomycetota
TGT
Thr
>WENV182817528
OJZM01000052
178580
Actinomycetota
GAA
Phe
>WENV182817504
OJZM01000042
481050
Actinomycetota
CCC
Gly
>WENV182817742
OJZM01000422
176638
Actinomycetota
GGG
Pro
>WENV182817803
OJZM01000633
176723
Actinomycetota
TCT
Arg
>WENV182817457
OJZM01000003
281239
Actinomycetota
TTT
Lys
>WENV182817759
OJZM01000495
280523
Actinomycetota
GGC
Ala
>WENV182817618
OJZM01000145
280523
Actinomycetota
GGC
Ala
>WENV182817496
OJZM01000037
176555
Actinomycetota
CAT
Met
>WENV182817677
OJZM01000202
46790
Actinomycetota
GAG
Leu
>WENV182817527
OJZM01000052
178579
Actinomycetota
GTC
Asp
>WENV182817624
OJZM01000150
283329
Actinomycetota
GTG
His
>WENV182817467
OJZM01000011
283327
Actinomycetota
TGC
Ala
>WENV182817655
OJZM01000190
20205
Actinomycetota
GCT
Ser
>WENV182817714
OJZM01000294
283335
Actinomycetota
CTT
Lys
>WENV182817628
OJZM01000154
358727
Actinomycetota
CCG
Arg
>WENV182817456
OJZM01000003
480329
Actinomycetota
CCC
Gly
>WENV182817537
OJZM01000060
175882
Actinomycetota
TGG
Pro
>WENV182817719
OJZM01000306
100161
Actinomycetota
CAG
Leu
>WENV182817533
OJZM01000058
300986
Actinomycetota
ACG
Arg
>WENV182817493
OJZM01000031
480319
Actinomycetota
TTG
Gln
>WENV182817468
OJZM01000012
280489
Actinomycetota
CTC
Glu
>WENV182817534
OJZM01000058
56387
Actinomycetota
CGA
Ser
>WENV182817738
OJZM01000414
280499
Actinomycetota
CCT
Arg
>WENV182817469
OJZM01000012
398853
Actinomycetota
CTG
Gln
>WENV182817721
OJZM01000314
237585
Actinomycetota
TAC
Val
>WENV182817586
OJZM01000095
504131
Actinomycetota
GCA
Cys
>WENV182817525
OJZM01000052
178582
Actinomycetota
TTT
Lys
>WENV182817458
OJZM01000003
104211
Actinomycetota
CAG
Leu
>WENV182817653
OJZM01000190
117903
Actinomycetota
GTA
Tyr
>WENV182817610
OJZM01000138
400420
Actinomycetota
CTG
Gln
>WENV182817648
OJZM01000175
283322
Actinomycetota
CGT
Thr
>WENV182817472
OJZM01000012
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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