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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182823921
OKBY01000027
210159
Gammaproteobacteria
CAT
Met
>WENV182823924
OKBY01000027
210159
Gammaproteobacteria
CAT
Met
>WENV182823949
OKBY01000208
5699
Gammaproteobacteria
GCT
Ser
>WENV182823925
OKBY01000029
404084
Gammaproteobacteria
CTG
Gln
>WENV182823981
OKBY01001463
121754
Gammaproteobacteria
TAG
Leu
>WENV182823880
OKBY01000001
195476
Gammaproteobacteria
GAC
Val
>WENV182823955
OKBY01000513
31109
Gammaproteobacteria
GGA
Ser
>WENV182823950
OKBY01000208
214538
Gammaproteobacteria
ACG
Arg
>WENV182823940
OKBY01000125
4023
Gammaproteobacteria
>WENV182823919
OKBY01000025
81247
Gammaproteobacteria
>WENV182823980
OKBY01001463
176541
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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