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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182840609
OKHN01000022
408526
Bacillota
GCA
Cys
>WENV182840659
OKHN01000099
296855
Bacillota
GGT
Thr
>WENV182840600
OKHN01000020
289717
Bacillota
CTT
Lys
>WENV182840675
OKHN01000126
20932
Bacillota
GCT
Ser
>WENV182840726
OKHN01002434
179251
Bacillota
CAT
Met
>WENV182840583
OKHN01000004
47161
Bacillota
>WENV182840669
OKHN01000116
183970
Bacillota
GTT
Asn
>WENV182840660
OKHN01000099
184495
Bacillota
CAT
Met
>WENV182840621
OKHN01000036
141202
Bacillota
CAA
Leu
>WENV182840656
OKHN01000099
289713
Bacillota
TGT
Thr
>WENV182840622
OKHN01000040
289716
Bacillota
GTG
His
>WENV182840598
OKHN01000017
480337
Bacillota
TCC
Gly
>WENV182840653
OKHN01000099
280547
Bacillota
GTC
Asp
>WENV182840606
OKHN01000022
280547
Bacillota
GTC
Asp
>WENV182840596
OKHN01000016
289715
Bacillota
TAC
Val
>WENV182840608
OKHN01000022
405393
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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