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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182854228
OKMQ01003761
200563
Bacillota
TGG
Pro
>WENV182854279
OKMQ01008865
296855
Bacillota
GGT
Thr
>WENV182854224
OKMQ01003570
287289
Bacillota
GCC
Gly
>WENV182854212
OKMQ01002851
20932
Bacillota
GCT
Ser
>WENV182854221
OKMQ01003558
215243
Bacillota
CAT
Met
>WENV182854217
OKMQ01003329
20942
Bacillota
GGA
Ser
>WENV182854222
OKMQ01003558
460732
Bacillota
TTC
Glu
>WENV182854280
OKMQ01008865
184495
Bacillota
CAT
Met
>WENV182854276
OKMQ01008865
289713
Bacillota
TGT
Thr
>WENV182854237
OKMQ01004211
175911
Bacillota
GTC
Asp
>WENV182854203
OKMQ01002392
480337
Bacillota
TCC
Gly
>WENV182854137
OKMQ01000251
292374
Bacillota
TGC
Ala
>WENV182854249
OKMQ01005421
401835
Bacillota
GCA
Cys
>WENV182854136
OKMQ01000251
201856
Bacillota
GAT
Ile
>WENV182854202
OKMQ01002392
208539
Bacillota
TGG
Pro
>WENV182854204
OKMQ01002392
184539
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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