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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182858415
OKOE01000018
283336
Actinomycetota
GGT
Thr
>WENV182858388
OKOE01000002
400421
Actinomycetota
GAC
Val
>WENV182858422
OKOE01000028
100162
Actinomycetota
TGA
Ser
>WENV182858394
OKOE01000003
283331
Actinomycetota
CTC
Glu
>WENV182858416
OKOE01000018
399203
Actinomycetota
CAT
Met
>WENV182858380
OKOE01000001
283323
Actinomycetota
TGT
Thr
>WENV182858399
OKOE01000005
178579
Actinomycetota
GTC
Asp
>WENV182858405
OKOE01000007
283329
Actinomycetota
GTG
His
>WENV182858460
OKOE01000972
283327
Actinomycetota
TGC
Ala
>WENV182858385
OKOE01000002
189180
Actinomycetota
GGG
Pro
>WENV182858406
OKOE01000007
283335
Actinomycetota
CTT
Lys
>WENV182858425
OKOE01000028
56387
Actinomycetota
CGA
Ser
>WENV182858474
OKOE01001742
280979
Actinomycetota
GGT
Thr
>WENV182858456
OKOE01000589
178582
Actinomycetota
TTT
Lys
>WENV182858393
OKOE01000003
400420
Actinomycetota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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