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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182860801
OKOZ01000023
180999
Gammaproteobacteria
CAT
Met
>WENV182860804
OKOZ01000023
180999
Gammaproteobacteria
CAT
Met
>WENV182860805
OKOZ01000023
404084
Gammaproteobacteria
CTG
Gln
>WENV182860836
OKOZ01000231
401199
Gammaproteobacteria
TCC
Gly
>WENV182860800
OKOZ01000020
119279
Gammaproteobacteria
GTA
Tyr
>WENV182860813
OKOZ01000041
285918
Gammaproteobacteria
GTG
His
>WENV182860791
OKOZ01000005
74049
Gammaproteobacteria
CAG
Leu
>WENV182860830
OKOZ01000172
286016
Gammaproteobacteria
TTT
Lys
>WENV182860829
OKOZ01000166
286016
Gammaproteobacteria
TTT
Lys
>WENV182860827
OKOZ01000166
286016
Gammaproteobacteria
TTT
Lys
>WENV182860822
OKOZ01000100
286016
Gammaproteobacteria
TTT
Lys
>WENV182860817
OKOZ01000054
282952
Gammaproteobacteria
TCT
Arg
>WENV182860920
OKOZ01000457
178818
Gammaproteobacteria
GAC
Val
>WENV182860802
OKOZ01000023
119263
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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