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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182912737
OKTM01019316
99852
Bacillota
GTA
Tyr
>WENV182912798
OKTM01038318
404076
Bacillota
GCC
Gly
>WENV182912752
OKTM01022941
280500
Bacillota
TGC
Ala
>WENV182912318
OKTM01000178
405363
Bacillota
GCA
Cys
>WENV182912684
OKTM01008612
280428
Bacillota
GAA
Phe
>WENV182912612
OKTM01003911
291579
Bacillota
GAA
Phe
>WENV182912295
OKTM01000138
280492
Bacillota
CTT
Lys
>WENV182912186
OKTM01000031
280492
Bacillota
CTT
Lys
>WENV182912289
OKTM01000127
175842
Bacillota
CAC
Val
>WENV182912525
OKTM01001613
184497
Bacillota
GGG
Pro
>WENV182912358
OKTM01000301
179176
Bacillota
ACG
Arg
>WENV182912555
OKTM01002146
184687
Bacillota
CAT
Met
>WENV182912624
OKTM01004259
295166
Bacillota
TGC
Ala
>WENV182912691
OKTM01009792
404079
Bacillota
CAT
Met
>WENV182912456
OKTM01000921
190476
Bacillota
CAT
Met
>WENV182912423
OKTM01000638
73664
Bacillota
CAG
Leu
>WENV182912419
OKTM01000613
73664
Bacillota
CAG
Leu
>WENV182912671
OKTM01006801
280447
Bacillota
GAC
Val
>WENV182912532
OKTM01001725
280447
Bacillota
GAC
Val
>WENV182912213
OKTM01000058
5692
Bacillota
GCT
Ser
>WENV182912535
OKTM01001799
186123
Bacillota
GTC
Asp
>WENV182912401
OKTM01000470
73009
Bacillota
CAG
Leu
>WENV182912771
OKTM01028112
481217
Bacillota
GCA
Cys
>WENV182912366
OKTM01000317
291581
Bacillota
CGG
Pro
>WENV182912221
OKTM01000067
175859
Bacillota
TCT
Arg
>WENV182912378
OKTM01000364
175831
Bacillota
ACG
Arg
>WENV182912255
OKTM01000080
179810
Bacillota
TCT
Arg
>WENV182912192
OKTM01000035
284627
Bacillota
GAA
Phe
>WENV182912536
OKTM01001799
291634
Bacillota
GAA
Phe
>WENV182912626
OKTM01004339
294020
Bacillota
TAC
Val
>WENV182912365
OKTM01000317
480322
Bacillota
CTG
Gln
>WENV182912203
OKTM01000046
480322
Bacillota
CTG
Gln
>WENV182912327
OKTM01000200
175868
Bacillota
GTT
Asn
>WENV182912215
OKTM01000060
175868
Bacillota
GTT
Asn
>WENV182912326
OKTM01000200
398854
Bacillota
CTC
Glu
>WENV182912214
OKTM01000059
291576
Bacillota
CCC
Gly
>WENV182912411
OKTM01000578
480324
Bacillota
TTG
Gln
>WENV182912259
OKTM01000081
56079
Bacillota
AAG
Leu
>WENV182912796
OKTM01036616
292374
Bacillota
TGC
Ala
>WENV182912646
OKTM01005478
186051
Bacillota
GAT
Ile
>WENV182912617
OKTM01004026
398857
Bacillota
TTC
Glu
>WENV182912371
OKTM01000341
117745
Bacillota
GTA
Tyr
>WENV182912383
OKTM01000381
280444
Bacillota
GGT
Thr
>WENV182912453
OKTM01000898
289745
Bacillota
TTT
Lys
>WENV182912355
OKTM01000286
281445
Bacillota
GTG
His
>WENV182912462
OKTM01001008
179755
Bacillota
CCG
Arg
>WENV182912504
OKTM01001270
46835
Bacillota
TAA
Leu
>WENV182912457
OKTM01000921
398832
Bacillota
TTC
Glu
>WENV182912190
OKTM01000035
118669
Bacillota
GTA
Tyr
>WENV182912303
OKTM01000147
280462
Bacillota
GAA
Phe
>WENV182912509
OKTM01001320
398852
Bacillota
CTC
Glu
>WENV182912755
OKTM01023494
118359
Bacillota
GTA
Tyr
>WENV182912600
OKTM01003717
289123
Bacillota
GGT
Thr
>WENV182912206
OKTM01000053
285601
Bacillota
TTC
Glu
>WENV182912209
OKTM01000057
285601
Bacillota
TTC
Glu
>WENV182912256
OKTM01000080
175857
Bacillota
GTG
His
>WENV182912183
OKTM01000025
398833
Bacillota
TGT
Thr
>WENV182912382
OKTM01000381
175849
Bacillota
GTC
Asp
>WENV182912304
OKTM01000147
280463
Bacillota
TTT
Lys
>WENV182912258
OKTM01000080
280463
Bacillota
TTT
Lys
>WENV182912726
OKTM01015521
280486
Bacillota
TGC
Ala
>WENV182912460
OKTM01000986
405393
Bacillota
GCC
Gly
>WENV182912212
OKTM01000058
56074
Bacillota
TGA
Ser
>WENV182912553
OKTM01002141
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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