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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182926561
OKUM01000364
179231
Actinomycetota
TAC
Val
>WENV182926470
OKUM01000176
176499
Actinomycetota
CAT
Met
>WENV182927243
OKUM01014334
280498
Actinomycetota
GTT
Asn
>WENV182926813
OKUM01001819
280503
Actinomycetota
CCT
Arg
>WENV182926329
OKUM01000016
459899
Actinomycetota
TTC
Glu
>WENV182926414
OKUM01000106
140768
Actinomycetota
TAG
Leu
>WENV182927215
OKUM01013106
447337
Actinomycetota
GAC
Val
>WENV182926643
OKUM01000619
175837
Actinomycetota
ACG
Arg
>WENV182926487
OKUM01000195
280702
Actinomycetota
GGC
Ala
>WENV182926796
OKUM01001714
398843
Actinomycetota
GTT
Asn
>WENV182926749
OKUM01001333
241064
Actinomycetota
CTC
Glu
>WENV182926399
OKUM01000088
176638
Actinomycetota
GGG
Pro
>WENV182926486
OKUM01000195
280524
Actinomycetota
TGC
Ala
>WENV182926921
OKUM01003199
291585
Actinomycetota
GCC
Gly
>WENV182926596
OKUM01000471
280523
Actinomycetota
GGC
Ala
>WENV182927254
OKUM01014966
287251
Actinomycetota
CTT
Lys
>WENV182926471
OKUM01000178
175841
Actinomycetota
TAT
Ile
>WENV182926893
OKUM01002827
280536
Actinomycetota
CTT
Lys
>WENV182927274
OKUM01015874
280496
Actinomycetota
CGT
Thr
>WENV182926331
OKUM01000016
175872
Actinomycetota
GTC
Asp
>WENV182926330
OKUM01000016
175872
Actinomycetota
GTC
Asp
>WENV182927423
OKUM01033243
280703
Actinomycetota
CCT
Arg
>WENV182926334
OKUM01000016
20205
Actinomycetota
GCT
Ser
>WENV182926789
OKUM01001658
175926
Actinomycetota
CAT
Met
>WENV182926490
OKUM01000208
280450
Actinomycetota
TTT
Lys
>WENV182926984
OKUM01004876
480329
Actinomycetota
CCC
Gly
>WENV182926748
OKUM01001333
483206
Actinomycetota
CTG
Gln
>WENV182926777
OKUM01001520
175882
Actinomycetota
TGG
Pro
>WENV182926466
OKUM01000167
20209
Actinomycetota
GAG
Leu
>WENV182926595
OKUM01000471
480319
Actinomycetota
TTG
Gln
>WENV182926507
OKUM01000237
280489
Actinomycetota
CTC
Glu
>WENV182926417
OKUM01000110
280499
Actinomycetota
CCT
Arg
>WENV182926923
OKUM01003246
297606
Actinomycetota
CCT
Arg
>WENV182926508
OKUM01000237
398853
Actinomycetota
CTG
Gln
>WENV182926776
OKUM01001520
175843
Actinomycetota
CAA
Leu
>WENV182926659
OKUM01000724
203883
Actinomycetota
TCT
Arg
>WENV182926333
OKUM01000016
46642
Actinomycetota
CGA
Ser
>WENV182926727
OKUM01001140
104211
Actinomycetota
CAG
Leu
>WENV182926469
OKUM01000176
117903
Actinomycetota
GTA
Tyr
>WENV182926328
OKUM01000016
56071
Actinomycetota
TGA
Ser
>WENV182926505
OKUM01000233
147796
Actinomycetota
TAA
Leu
>WENV182926413
OKUM01000106
280470
Actinomycetota
CGT
Thr
>WENV182927444
OKUM01036439
480376
Actinomycetota
CCC
Gly
>WENV182927459
OKUM01040298
348330
Actinomycetota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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