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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182952933
OKVX01000695
281299
Bacillota
TTT
Lys
>WENV182953116
OKVX01005823
281299
Bacillota
TTT
Lys
>WENV182952934
OKVX01000695
119388
Bacillota
TAG
Leu
>WENV182952937
OKVX01000695
184235
Bacillota
TCG
Arg
>WENV182953046
OKVX01002613
399268
Bacillota
ACG
Arg
>WENV182952963
OKVX01000938
280870
Bacillota
TGC
Ala
>WENV182953097
OKVX01004373
280870
Bacillota
TGC
Ala
>WENV182952936
OKVX01000695
480520
Bacillota
TCC
Gly
>WENV182953198
OKVX01020637
184537
Bacillota
ACG
Arg
>WENV182952880
OKVX01000336
29462
Bacillota
GGA
Ser
>WENV182953031
OKVX01002076
282753
Bacillota
TAC
Val
>WENV182952930
OKVX01000695
176679
Bacillota
TCT
Arg
>WENV182952915
OKVX01000601
403916
Bacillota
CTG
Gln
>WENV182953197
OKVX01020511
180107
Bacillota
TCT
Arg
>WENV182952919
OKVX01000613
400111
Bacillota
GTT
Asn
>WENV182953032
OKVX01002076
176678
Bacillota
GTC
Asp
>WENV182952953
OKVX01000883
289738
Bacillota
GGT
Thr
>WENV182953054
OKVX01002706
398935
Bacillota
>WENV182952994
OKVX01001441
141173
Bacillota
GTA
Tyr
>WENV182952965
OKVX01000938
20274
Bacillota
GCT
Ser
>WENV182953163
OKVX01013040
20360
Bacillota
TGA
Ser
>WENV182952958
OKVX01000924
282752
Bacillota
TTT
Lys
>WENV182952864
OKVX01000217
46686
Bacillota
TAA
Leu
>WENV182953108
OKVX01005331
20932
Bacillota
GCT
Ser
>WENV182953114
OKVX01005708
291553
Bacillota
GAA
Phe
>WENV182952964
OKVX01000938
20238
Bacillota
TGA
Ser
>WENV182952820
OKVX01000041
179251
Bacillota
CAT
Met
>WENV182953100
OKVX01004586
20942
Bacillota
GGA
Ser
>WENV182952935
OKVX01000695
400719
Bacillota
GCC
Gly
>WENV182952865
OKVX01000217
399266
Bacillota
>WENV182952969
OKVX01000990
73130
Bacillota
CAA
Leu
>WENV182952959
OKVX01000924
140815
Bacillota
TAG
Leu
>WENV182953109
OKVX01005382
140815
Bacillota
TAG
Leu
>WENV182952950
OKVX01000762
403917
Bacillota
CCT
Arg
>WENV182952861
OKVX01000197
183970
Bacillota
GTT
Asn
>WENV182953020
OKVX01001890
280871
Bacillota
GAA
Phe
>WENV182952960
OKVX01000924
400112
Bacillota
GCC
Gly
>WENV182952916
OKVX01000601
100988
Bacillota
AAG
Leu
>WENV182953011
OKVX01001766
29614
Bacillota
GGA
Ser
>WENV182952961
OKVX01000924
480905
Bacillota
TCC
Gly
>WENV182952995
OKVX01001483
480905
Bacillota
TCC
Gly
>WENV182953110
OKVX01005382
480905
Bacillota
TCC
Gly
>WENV182952996
OKVX01001483
282756
Bacillota
CTT
Lys
>WENV182953041
OKVX01002379
100098
Bacillota
GAG
Leu
>WENV182953177
OKVX01015831
282730
Bacillota
TAC
Val
>WENV182952931
OKVX01000695
281302
Bacillota
GTG
His
>WENV182953014
OKVX01001804
293309
Bacillota
GTT
Asn
>WENV182952945
OKVX01000724
281300
Bacillota
GAA
Phe
>WENV182952975
OKVX01001063
281300
Bacillota
GAA
Phe
>WENV182952918
OKVX01000610
399272
Bacillota
GCA
Cys
>WENV182952976
OKVX01001063
399272
Bacillota
GCA
Cys
>WENV182952962
OKVX01000924
178067
Bacillota
TCG
Arg
>WENV182953024
OKVX01001931
481163
Bacillota
TCC
Gly
>WENV182953003
OKVX01001543
481163
Bacillota
TCC
Gly
>WENV182952825
OKVX01000041
481163
Bacillota
TCC
Gly
>WENV182952940
OKVX01000710
287736
Bacillota
TAC
Val
>WENV182952909
OKVX01000509
100097
Bacillota
GTA
Tyr
>WENV182953164
OKVX01013040
20361
Bacillota
GCT
Ser
>WENV182953187
OKVX01016826
480337
Bacillota
TCC
Gly
>WENV182952848
OKVX01000124
117891
Bacillota
TAG
Leu
>WENV182952956
OKVX01000924
282757
Bacillota
GTG
His
>WENV182953113
OKVX01005708
280547
Bacillota
GTC
Asp
>WENV182953015
OKVX01001804
289761
Bacillota
TTT
Lys
>WENV182952955
OKVX01000924
176771
Bacillota
TCT
Arg
>WENV182953105
OKVX01005118
178065
Bacillota
ACG
Arg
>WENV182952908
OKVX01000509
282754
Bacillota
TGT
Thr
>WENV182953134
OKVX01007059
282754
Bacillota
TGT
Thr
>WENV182952863
OKVX01000204
282755
Bacillota
GGT
Thr
>WENV182953017
OKVX01001804
289715
Bacillota
TAC
Val
>WENV182953128
OKVX01006792
20943
Bacillota
CGA
Ser
>WENV182952941
OKVX01000710
399260
Bacillota
TGT
Thr
>WENV182952829
OKVX01000050
288984
Bacillota
TGG
Pro
>WENV182952944
OKVX01000724
288984
Bacillota
TGG
Pro
>WENV182953030
OKVX01002076
399261
Bacillota
>WENV182952942
OKVX01000710
399261
Bacillota
>WENV182952939
OKVX01000710
399261
Bacillota
>WENV182952957
OKVX01000924
400113
Bacillota
TTG
Gln
>WENV182952932
OKVX01000695
399264
Bacillota
TTG
Gln
>WENV182952943
OKVX01000723
400841
Bacillota
CTC
Glu
>WENV182953166
OKVX01013206
20570
Bacillota
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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