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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
93 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182972661
OKXI01068884
200563
Bacillota
TGG
Pro
>WENV182972083
OKXI01010732
99852
Bacillota
GTA
Tyr
>WENV182971953
OKXI01005736
280500
Bacillota
TGC
Ala
>WENV182972689
OKXI01071048
280500
Bacillota
TGC
Ala
>WENV182972298
OKXI01025951
349107
Bacillota
GCC
Gly
>WENV182972597
OKXI01060537
349107
Bacillota
GCC
Gly
>WENV182972599
OKXI01060537
349107
Bacillota
GCC
Gly
>WENV182972629
OKXI01063643
349107
Bacillota
GCC
Gly
>WENV182972627
OKXI01063384
480520
Bacillota
TCC
Gly
>WENV182972299
OKXI01025951
405363
Bacillota
GCA
Cys
>WENV182972812
OKXI01092979
290391
Bacillota
TAC
Val
>WENV182972596
OKXI01060537
280428
Bacillota
GAA
Phe
>WENV182972593
OKXI01059955
405357
Bacillota
TTC
Glu
>WENV182972616
OKXI01063126
291579
Bacillota
GAA
Phe
>WENV182971663
OKXI01001132
291579
Bacillota
GAA
Phe
>WENV182971528
OKXI01000399
229015
Bacillota
GTG
His
>WENV182971662
OKXI01001132
179917
Bacillota
CAT
Met
>WENV182971517
OKXI01000354
179917
Bacillota
CAT
Met
>WENV182972660
OKXI01068884
280644
Bacillota
CCA
Trp
>WENV182972495
OKXI01043899
175842
Bacillota
CAC
Val
>WENV182972049
OKXI01009537
175842
Bacillota
CAC
Val
>WENV182972896
OKXI01108296
236579
Bacillota
GAT
Ile
>WENV182971652
OKXI01001111
236579
Bacillota
GAT
Ile
>WENV182972483
OKXI01042438
456395
Bacillota
TTC
Glu
>WENV182972318
OKXI01027427
184497
Bacillota
GGG
Pro
>WENV182972664
OKXI01068884
176018
Bacillota
CAT
Met
>WENV182971903
OKXI01004509
179563
Bacillota
GAT
Ile
>WENV182972571
OKXI01056277
295166
Bacillota
TGC
Ala
>WENV182971651
OKXI01001111
295166
Bacillota
TGC
Ala
>WENV182972625
OKXI01063384
141334
Bacillota
TAG
Leu
>WENV182971962
OKXI01006157
82124
Bacillota
TAA
Leu
>WENV182972701
OKXI01073009
280447
Bacillota
GAC
Val
>WENV182972032
OKXI01008771
280447
Bacillota
GAC
Val
>WENV182971762
OKXI01002089
280447
Bacillota
GAC
Val
>WENV182972877
OKXI01104678
5692
Bacillota
GCT
Ser
>WENV182971871
OKXI01003985
186123
Bacillota
GTC
Asp
>WENV182972775
OKXI01086740
280427
Bacillota
TAC
Val
>WENV182972371
OKXI01032223
280427
Bacillota
TAC
Val
>WENV182972548
OKXI01052277
284723
Bacillota
TAC
Val
>WENV182971514
OKXI01000354
284723
Bacillota
TAC
Val
>WENV182971435
OKXI01000095
284723
Bacillota
TAC
Val
>WENV182972050
OKXI01009551
73009
Bacillota
CAG
Leu
>WENV182971778
OKXI01002366
73009
Bacillota
CAG
Leu
>WENV182971570
OKXI01000537
73009
Bacillota
CAG
Leu
>WENV182971794
OKXI01002655
189473
Bacillota
GAT
Ile
>WENV182972438
OKXI01037154
291581
Bacillota
CGG
Pro
>WENV182971999
OKXI01007358
290325
Bacillota
GCC
Gly
>WENV182972751
OKXI01081897
290325
Bacillota
GCC
Gly
>WENV182971927
OKXI01005136
175831
Bacillota
ACG
Arg
>WENV182971527
OKXI01000399
179810
Bacillota
TCT
Arg
>WENV182972311
OKXI01026808
291634
Bacillota
GAA
Phe
>WENV182971872
OKXI01003985
291634
Bacillota
GAA
Phe
>WENV182971957
OKXI01006059
346451
Bacillota
TTT
Lys
>WENV182972801
OKXI01090188
195824
Bacillota
GAT
Ile
>WENV182972656
OKXI01067849
27216
Bacillota
GCT
Ser
>WENV182972437
OKXI01037154
480322
Bacillota
CTG
Gln
>WENV182971984
OKXI01007162
480322
Bacillota
CTG
Gln
>WENV182972388
OKXI01033391
187364
Bacillota
CAT
Met
>WENV182972233
OKXI01020742
175868
Bacillota
GTT
Asn
>WENV182972636
OKXI01064639
314834
Bacillota
TGC
Ala
>WENV182972232
OKXI01020742
398854
Bacillota
CTC
Glu
>WENV182971681
OKXI01001280
398854
Bacillota
CTC
Glu
>WENV182972197
OKXI01017990
291576
Bacillota
CCC
Gly
>WENV182971934
OKXI01005348
291576
Bacillota
CCC
Gly
>WENV182972131
OKXI01013220
480324
Bacillota
TTG
Gln
>WENV182971722
OKXI01001617
303718
Bacillota
TGT
Thr
>WENV182972118
OKXI01012878
398857
Bacillota
TTC
Glu
>WENV182972230
OKXI01020438
280444
Bacillota
GGT
Thr
>WENV182971672
OKXI01001160
280444
Bacillota
GGT
Thr
>WENV182971669
OKXI01001160
280444
Bacillota
GGT
Thr
>WENV182972624
OKXI01063384
354380
Bacillota
TTT
Lys
>WENV182972594
OKXI01060128
46643
Bacillota
TGA
Ser
>WENV182972724
OKXI01076755
223045
Bacillota
GAT
Ile
>WENV182971617
OKXI01000853
179755
Bacillota
CCG
Arg
>WENV182972863
OKXI01100835
398832
Bacillota
TTC
Glu
>WENV182972056
OKXI01009838
25955
Bacillota
GCT
Ser
>WENV182971961
OKXI01006157
118669
Bacillota
GTA
Tyr
>WENV182972808
OKXI01092847
52748
Bacillota
TGA
Ser
>WENV182972260
OKXI01022000
398852
Bacillota
CTC
Glu
>WENV182971992
OKXI01007272
289123
Bacillota
GGT
Thr
>WENV182972416
OKXI01035318
298260
Bacillota
GTT
Asn
>WENV182972667
OKXI01069084
175857
Bacillota
GTG
His
>WENV182972815
OKXI01092979
285756
Bacillota
GCC
Gly
>WENV182972811
OKXI01092979
285756
Bacillota
GCC
Gly
>WENV182972445
OKXI01038945
285756
Bacillota
GCC
Gly
>WENV182972520
OKXI01048783
398833
Bacillota
TGT
Thr
>WENV182972598
OKXI01060537
175849
Bacillota
GTC
Asp
>WENV182971671
OKXI01001160
175849
Bacillota
GTC
Asp
>WENV182972586
OKXI01059422
280486
Bacillota
TGC
Ala
>WENV182972312
OKXI01026808
405393
Bacillota
GCC
Gly
>WENV182972098
OKXI01011221
56074
Bacillota
TGA
Ser
>WENV182972041
OKXI01009372
280473
Bacillota
TGG
Pro
>WENV182972646
OKXI01066137
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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