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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
106 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183078987
OLIX01008152
212982
Bacillota
ACG
Arg
>WENV183078511
OLIX01002065
343590
Bacillota
GCC
Gly
>WENV183078634
OLIX01003071
343590
Bacillota
GCC
Gly
>WENV183079605
OLIX01044748
280500
Bacillota
TGC
Ala
>WENV183079675
OLIX01053224
349107
Bacillota
GCC
Gly
>WENV183079414
OLIX01025614
480520
Bacillota
TCC
Gly
>WENV183079561
OLIX01040756
405363
Bacillota
GCA
Cys
>WENV183079688
OLIX01056479
405357
Bacillota
TTC
Glu
>WENV183079761
OLIX01069066
176678
Bacillota
GTC
Asp
>WENV183078242
OLIX01000852
280492
Bacillota
CTT
Lys
>WENV183078030
OLIX01000294
280492
Bacillota
CTT
Lys
>WENV183079258
OLIX01017300
175842
Bacillota
CAC
Val
>WENV183078567
OLIX01002450
291629
Bacillota
CCA
Trp
>WENV183079640
OLIX01047299
184497
Bacillota
GGG
Pro
>WENV183079444
OLIX01027287
176018
Bacillota
CAT
Met
>WENV183079442
OLIX01027012
179563
Bacillota
GAT
Ile
>WENV183079158
OLIX01012966
179176
Bacillota
ACG
Arg
>WENV183079362
OLIX01022662
229487
Bacillota
GTC
Asp
>WENV183079484
OLIX01031020
190476
Bacillota
CAT
Met
>WENV183079142
OLIX01012083
190476
Bacillota
CAT
Met
>WENV183079646
OLIX01047914
176014
Bacillota
TCT
Arg
>WENV183079328
OLIX01020715
82124
Bacillota
TAA
Leu
>WENV183079124
OLIX01011370
73664
Bacillota
CAG
Leu
>WENV183079695
OLIX01057003
280447
Bacillota
GAC
Val
>WENV183078568
OLIX01002463
312274
Bacillota
GGC
Ala
>WENV183078002
OLIX01000239
312274
Bacillota
GGC
Ala
>WENV183078565
OLIX01002450
186123
Bacillota
GTC
Asp
>WENV183078344
OLIX01001301
186123
Bacillota
GTC
Asp
>WENV183079415
OLIX01025614
291558
Bacillota
CTT
Lys
>WENV183079188
OLIX01014104
73009
Bacillota
CAG
Leu
>WENV183079008
OLIX01008606
73009
Bacillota
CAG
Leu
>WENV183078638
OLIX01003125
481217
Bacillota
GCA
Cys
>WENV183078821
OLIX01005149
407726
Bacillota
CTG
Gln
>WENV183079077
OLIX01010144
291581
Bacillota
CGG
Pro
>WENV183079707
OLIX01058481
175859
Bacillota
TCT
Arg
>WENV183079441
OLIX01027012
353153
Bacillota
TGC
Ala
>WENV183078250
OLIX01000873
332181
Bacillota
TGT
Thr
>WENV183078057
OLIX01000335
284627
Bacillota
GAA
Phe
>WENV183079890
OLIX01104825
281305
Bacillota
CAT
Met
>WENV183078345
OLIX01001301
291634
Bacillota
GAA
Phe
>WENV183079130
OLIX01011634
346451
Bacillota
TTT
Lys
>WENV183078743
OLIX01003981
346451
Bacillota
TTT
Lys
>WENV183078419
OLIX01001599
346451
Bacillota
TTT
Lys
>WENV183079451
OLIX01027287
280640
Bacillota
TAC
Val
>WENV183079583
OLIX01042471
27216
Bacillota
GCT
Ser
>WENV183078140
OLIX01000539
27216
Bacillota
GCT
Ser
>WENV183079103
OLIX01010793
480322
Bacillota
CTG
Gln
>WENV183079076
OLIX01010144
480322
Bacillota
CTG
Gln
>WENV183079169
OLIX01013435
187364
Bacillota
CAT
Met
>WENV183079329
OLIX01020724
141533
Bacillota
CAA
Leu
>WENV183079497
OLIX01032683
175868
Bacillota
GTT
Asn
>WENV183079202
OLIX01014500
175868
Bacillota
GTT
Asn
>WENV183079711
OLIX01058911
314834
Bacillota
TGC
Ala
>WENV183079487
OLIX01031475
120584
Bacillota
GTA
Tyr
>WENV183079201
OLIX01014500
398854
Bacillota
CTC
Glu
>WENV183079306
OLIX01020009
291576
Bacillota
CCC
Gly
>WENV183078740
OLIX01003920
480324
Bacillota
TTG
Gln
>WENV183078667
OLIX01003271
497729
Bacillota
CCA
Trp
>WENV183079117
OLIX01011189
303718
Bacillota
TGT
Thr
>WENV183079579
OLIX01041880
73638
Bacillota
AAG
Leu
>WENV183079753
OLIX01067263
56079
Bacillota
AAG
Leu
>WENV183079243
OLIX01016791
323864
Bacillota
TGC
Ala
>WENV183079602
OLIX01044553
484479
Bacillota
GCA
Cys
>WENV183078196
OLIX01000680
398857
Bacillota
TTC
Glu
>WENV183078579
OLIX01002575
204381
Bacillota
GAT
Ile
>WENV183078282
OLIX01000980
204381
Bacillota
GAT
Ile
>WENV183078169
OLIX01000604
117745
Bacillota
GTA
Tyr
>WENV183078056
OLIX01000333
117745
Bacillota
GTA
Tyr
>WENV183079585
OLIX01042624
280444
Bacillota
GGT
Thr
>WENV183079494
OLIX01032499
280444
Bacillota
GGT
Thr
>WENV183078915
OLIX01006629
317482
Bacillota
TAC
Val
>WENV183079240
OLIX01016696
483485
Bacillota
CCC
Gly
>WENV183078116
OLIX01000471
483485
Bacillota
CCC
Gly
>WENV183079315
OLIX01020314
354380
Bacillota
TTT
Lys
>WENV183079750
OLIX01066674
291597
Bacillota
TGC
Ala
>WENV183079865
OLIX01096145
179755
Bacillota
CCG
Arg
>WENV183079375
OLIX01023213
58120
Bacillota
AAG
Leu
>WENV183079121
OLIX01011257
344985
Bacillota
GAA
Phe
>WENV183079498
OLIX01033076
46835
Bacillota
TAA
Leu
>WENV183079287
OLIX01019212
46835
Bacillota
TAA
Leu
>WENV183078710
OLIX01003526
330413
Bacillota
CTT
Lys
>WENV183079485
OLIX01031020
398832
Bacillota
TTC
Glu
>WENV183079143
OLIX01012083
398832
Bacillota
TTC
Glu
>WENV183079314
OLIX01020314
203851
Bacillota
TCT
Arg
>WENV183078622
OLIX01002933
118669
Bacillota
GTA
Tyr
>WENV183079139
OLIX01011959
52748
Bacillota
TGA
Ser
>WENV183079321
OLIX01020602
280462
Bacillota
GAA
Phe
>WENV183078171
OLIX01000604
280462
Bacillota
GAA
Phe
>WENV183078702
OLIX01003491
398852
Bacillota
CTC
Glu
>WENV183078495
OLIX01001992
398852
Bacillota
CTC
Glu
>WENV183077857
OLIX01000088
398852
Bacillota
CTC
Glu
>WENV183077759
OLIX01000013
398852
Bacillota
CTC
Glu
>WENV183077991
OLIX01000230
118359
Bacillota
GTA
Tyr
>WENV183078253
OLIX01000873
289123
Bacillota
GGT
Thr
>WENV183078281
OLIX01000977
285601
Bacillota
TTC
Glu
>WENV183078280
OLIX01000977
285601
Bacillota
TTC
Glu
>WENV183077744
OLIX01000005
285756
Bacillota
GCC
Gly
>WENV183078868
OLIX01005971
398833
Bacillota
TGT
Thr
>WENV183079584
OLIX01042624
175849
Bacillota
GTC
Asp
>WENV183078172
OLIX01000604
280463
Bacillota
TTT
Lys
>WENV183078480
OLIX01001959
179166
Bacillota
TCT
Arg
>WENV183078803
OLIX01004737
405393
Bacillota
GCC
Gly
>WENV183078566
OLIX01002450
405393
Bacillota
GCC
Gly
>WENV183078346
OLIX01001301
405393
Bacillota
GCC
Gly
>WENV183077912
OLIX01000140
405393
Bacillota
GCC
Gly
>WENV183079308
OLIX01020141
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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