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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
74 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183162350
OLOW01000135
404076
Bacillota
GCC
Gly
>WENV183163408
OLOW01011796
404076
Bacillota
GCC
Gly
>WENV183162348
OLOW01000135
184504
Bacillota
GTC
Asp
>WENV183162353
OLOW01000140
290391
Bacillota
TAC
Val
>WENV183162998
OLOW01003847
290391
Bacillota
TAC
Val
>WENV183163079
OLOW01005048
280428
Bacillota
GAA
Phe
>WENV183163068
OLOW01004930
291579
Bacillota
GAA
Phe
>WENV183162951
OLOW01003349
141454
Bacillota
TAG
Leu
>WENV183164110
OLOW01077203
48505
Bacillota
TGA
Ser
>WENV183162949
OLOW01003349
418726
Bacillota
TGT
Thr
>WENV183162953
OLOW01003349
280642
Bacillota
TTG
Gln
>WENV183163797
OLOW01029346
175842
Bacillota
CAC
Val
>WENV183162954
OLOW01003349
280639
Bacillota
TTT
Lys
>WENV183163552
OLOW01016302
184497
Bacillota
GGG
Pro
>WENV183163506
OLOW01014506
184497
Bacillota
GGG
Pro
>WENV183163715
OLOW01024035
215243
Bacillota
CAT
Met
>WENV183162842
OLOW01002489
404079
Bacillota
CAT
Met
>WENV183163188
OLOW01006416
190476
Bacillota
CAT
Met
>WENV183162952
OLOW01003349
176014
Bacillota
TCT
Arg
>WENV183163485
OLOW01013770
280447
Bacillota
GAC
Val
>WENV183163815
OLOW01031106
5692
Bacillota
GCT
Ser
>WENV183163416
OLOW01012050
175825
Bacillota
GAT
Ile
>WENV183163708
OLOW01023452
73009
Bacillota
CAG
Leu
>WENV183163855
OLOW01035320
481217
Bacillota
GCA
Cys
>WENV183163375
OLOW01010629
280646
Bacillota
TGC
Ala
>WENV183162723
OLOW01001643
407840
Bacillota
TTC
Glu
>WENV183163218
OLOW01007048
175859
Bacillota
TCT
Arg
>WENV183162948
OLOW01003349
280641
Bacillota
GTT
Asn
>WENV183164100
OLOW01075824
399152
Bacillota
GCC
Gly
>WENV183162790
OLOW01002073
21311
Bacillota
GCT
Ser
>WENV183163824
OLOW01031885
175831
Bacillota
ACG
Arg
>WENV183163331
OLOW01009686
284627
Bacillota
GAA
Phe
>WENV183162349
OLOW01000135
291634
Bacillota
GAA
Phe
>WENV183162825
OLOW01002259
183957
Bacillota
CCT
Arg
>WENV183163791
OLOW01028091
484885
Bacillota
TCC
Gly
>WENV183163682
OLOW01021889
480322
Bacillota
CTG
Gln
>WENV183163830
OLOW01032284
401685
Bacillota
TTG
Gln
>WENV183163931
OLOW01045164
175868
Bacillota
GTT
Asn
>WENV183163930
OLOW01045164
398854
Bacillota
CTC
Glu
>WENV183162738
OLOW01001771
497729
Bacillota
CCA
Trp
>WENV183163745
OLOW01025691
303718
Bacillota
TGT
Thr
>WENV183163595
OLOW01017871
303718
Bacillota
TGT
Thr
>WENV183163064
OLOW01004861
303718
Bacillota
TGT
Thr
>WENV183162636
OLOW01001106
303718
Bacillota
TGT
Thr
>WENV183163457
OLOW01013275
176019
Bacillota
GTG
His
>WENV183163284
OLOW01008338
398857
Bacillota
TTC
Glu
>WENV183162346
OLOW01000128
204381
Bacillota
GAT
Ile
>WENV183163921
OLOW01044060
280444
Bacillota
GGT
Thr
>WENV183164011
OLOW01055771
317482
Bacillota
TAC
Val
>WENV183162877
OLOW01002830
317482
Bacillota
TAC
Val
>WENV183162709
OLOW01001584
179845
Bacillota
CGG
Pro
>WENV183164103
OLOW01076122
223045
Bacillota
GAT
Ile
>WENV183163543
OLOW01016152
223045
Bacillota
GAT
Ile
>WENV183163641
OLOW01019862
179755
Bacillota
CCG
Arg
>WENV183163321
OLOW01009391
58120
Bacillota
AAG
Leu
>WENV183162773
OLOW01002001
46835
Bacillota
TAA
Leu
>WENV183163189
OLOW01006416
398832
Bacillota
TTC
Glu
>WENV183164145
OLOW01089671
118669
Bacillota
GTA
Tyr
>WENV183162772
OLOW01002001
175915
Bacillota
GTC
Asp
>WENV183162459
OLOW01000381
280476
Bacillota
TTT
Lys
>WENV183162939
OLOW01003286
332651
Bacillota
GTT
Asn
>WENV183163343
OLOW01009873
280462
Bacillota
GAA
Phe
>WENV183163761
OLOW01026748
201856
Bacillota
GAT
Ile
>WENV183163042
OLOW01004359
118370
Bacillota
TAG
Leu
>WENV183162327
OLOW01000073
285601
Bacillota
TTC
Glu
>WENV183162326
OLOW01000073
285601
Bacillota
TTC
Glu
>WENV183163829
OLOW01032284
175857
Bacillota
GTG
His
>WENV183163031
OLOW01004179
398833
Bacillota
TGT
Thr
>WENV183163920
OLOW01044060
175849
Bacillota
GTC
Asp
>WENV183163637
OLOW01019739
317820
Bacillota
TAC
Val
>WENV183163867
OLOW01037172
280486
Bacillota
TGC
Ala
>WENV183163814
OLOW01031106
56074
Bacillota
TGA
Ser
>WENV183163835
OLOW01033151
482078
Bacillota
CCC
Gly
>WENV183163771
OLOW01027182
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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