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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183188680
OLPP01010502
176033
Bacillota
CAT
Met
>WENV183188246
OLPP01000265
416763
Bacillota
CTC
Glu
>WENV183188247
OLPP01000268
290391
Bacillota
TAC
Val
>WENV183188326
OLPP01000394
290391
Bacillota
TAC
Val
>WENV183188367
OLPP01000535
290391
Bacillota
TAC
Val
>WENV183188535
OLPP01002137
290391
Bacillota
TAC
Val
>WENV183188574
OLPP01003010
290391
Bacillota
TAC
Val
>WENV183188704
OLPP01013438
282753
Bacillota
TAC
Val
>WENV183188183
OLPP01000176
291579
Bacillota
GAA
Phe
>WENV183188517
OLPP01001903
291579
Bacillota
GAA
Phe
>WENV183188705
OLPP01013438
176678
Bacillota
GTC
Asp
>WENV183188060
OLPP01000066
280492
Bacillota
CTT
Lys
>WENV183188054
OLPP01000065
280492
Bacillota
CTT
Lys
>WENV183188585
OLPP01003515
29930
Bacillota
GGA
Ser
>WENV183188021
OLPP01000041
184497
Bacillota
GGG
Pro
>WENV183188151
OLPP01000139
184497
Bacillota
GGG
Pro
>WENV183188330
OLPP01000402
184497
Bacillota
GGG
Pro
>WENV183188555
OLPP01002595
184497
Bacillota
GGG
Pro
>WENV183188512
OLPP01001781
179176
Bacillota
ACG
Arg
>WENV183188066
OLPP01000071
179176
Bacillota
ACG
Arg
>WENV183188035
OLPP01000047
179176
Bacillota
ACG
Arg
>WENV183188754
OLPP01022750
282752
Bacillota
TTT
Lys
>WENV183188640
OLPP01007681
283622
Bacillota
CTT
Lys
>WENV183187990
OLPP01000028
73664
Bacillota
CAG
Leu
>WENV183188652
OLPP01008865
175825
Bacillota
GAT
Ile
>WENV183188157
OLPP01000146
284723
Bacillota
TAC
Val
>WENV183188565
OLPP01002715
487804
Bacillota
GGT
Thr
>WENV183188459
OLPP01001002
481217
Bacillota
GCA
Cys
>WENV183188528
OLPP01001989
102491
Bacillota
>WENV183188203
OLPP01000191
407726
Bacillota
CTG
Gln
>WENV183188458
OLPP01000995
187589
Bacillota
CAT
Met
>WENV183188703
OLPP01013438
424271
Bacillota
>WENV183188244
OLPP01000262
294020
Bacillota
TAC
Val
>WENV183188771
OLPP01029382
480905
Bacillota
TCC
Gly
>WENV183188673
OLPP01010502
119278
Bacillota
TAG
Leu
>WENV183188519
OLPP01001918
287280
Bacillota
TGT
Thr
>WENV183188372
OLPP01000561
400963
Bacillota
GTT
Asn
>WENV183188335
OLPP01000407
400963
Bacillota
GTT
Asn
>WENV183188318
OLPP01000389
180688
Bacillota
GTC
Asp
>WENV183188140
OLPP01000137
175899
Bacillota
GTC
Asp
>WENV183188389
OLPP01000583
73638
Bacillota
AAG
Leu
>WENV183187989
OLPP01000028
56079
Bacillota
AAG
Leu
>WENV183187988
OLPP01000028
56079
Bacillota
AAG
Leu
>WENV183188636
OLPP01006796
175911
Bacillota
GTC
Asp
>WENV183188668
OLPP01010396
398857
Bacillota
TTC
Glu
>WENV183188642
OLPP01007721
204381
Bacillota
GAT
Ile
>WENV183188274
OLPP01000304
117745
Bacillota
GTA
Tyr
>WENV183188405
OLPP01000665
46643
Bacillota
TGA
Ser
>WENV183188773
OLPP01029382
282757
Bacillota
GTG
His
>WENV183188402
OLPP01000646
58120
Bacillota
AAG
Leu
>WENV183188032
OLPP01000046
58120
Bacillota
AAG
Leu
>WENV183188031
OLPP01000046
58120
Bacillota
AAG
Leu
>WENV183188468
OLPP01001144
198522
Bacillota
GAT
Ile
>WENV183188467
OLPP01001144
198522
Bacillota
GAT
Ile
>WENV183188772
OLPP01029382
176771
Bacillota
TCT
Arg
>WENV183188382
OLPP01000565
280476
Bacillota
TTT
Lys
>WENV183188380
OLPP01000565
280476
Bacillota
TTT
Lys
>WENV183188201
OLPP01000189
280476
Bacillota
TTT
Lys
>WENV183188314
OLPP01000389
332651
Bacillota
GTT
Asn
>WENV183188387
OLPP01000571
280462
Bacillota
GAA
Phe
>WENV183188411
OLPP01000735
398852
Bacillota
CTC
Glu
>WENV183188295
OLPP01000357
398852
Bacillota
CTC
Glu
>WENV183188094
OLPP01000091
398852
Bacillota
CTC
Glu
>WENV183188110
OLPP01000113
309916
Bacillota
TTT
Lys
>WENV183188433
OLPP01000901
118359
Bacillota
GTA
Tyr
>WENV183188545
OLPP01002370
201856
Bacillota
GAT
Ile
>WENV183188019
OLPP01000040
280483
Bacillota
GAA
Phe
>WENV183187902
OLPP01000007
298260
Bacillota
GTT
Asn
>WENV183188492
OLPP01001491
285601
Bacillota
TTC
Glu
>WENV183188147
OLPP01000137
175857
Bacillota
GTG
His
>WENV183188020
OLPP01000040
285756
Bacillota
GCC
Gly
>WENV183187883
OLPP01000006
285756
Bacillota
GCC
Gly
>WENV183188774
OLPP01029382
400113
Bacillota
TTG
Gln
>WENV183188149
OLPP01000137
280463
Bacillota
TTT
Lys
>WENV183188701
OLPP01013101
400110
Bacillota
CCT
Arg
>WENV183188198
OLPP01000189
179166
Bacillota
TCT
Arg
>WENV183188219
OLPP01000219
219372
Bacillota
CAT
Met
>WENV183188511
OLPP01001760
20570
Bacillota
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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