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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
126 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183245384
OLRE01002871
343590
Bacillota
GCC
Gly
>WENV183244825
OLRE01000491
349107
Bacillota
GCC
Gly
>WENV183244829
OLRE01000491
349107
Bacillota
GCC
Gly
>WENV183245616
OLRE01006787
405363
Bacillota
GCA
Cys
>WENV183244611
OLRE01000191
290391
Bacillota
TAC
Val
>WENV183244791
OLRE01000384
290391
Bacillota
TAC
Val
>WENV183244828
OLRE01000491
280428
Bacillota
GAA
Phe
>WENV183245633
OLRE01007239
405357
Bacillota
TTC
Glu
>WENV183246072
OLRE01055418
291579
Bacillota
GAA
Phe
>WENV183244871
OLRE01000579
229015
Bacillota
GTG
His
>WENV183245478
OLRE01003653
179917
Bacillota
CAT
Met
>WENV183244826
OLRE01000491
280466
Bacillota
TAC
Val
>WENV183245252
OLRE01002116
175842
Bacillota
CAC
Val
>WENV183245153
OLRE01001538
175842
Bacillota
CAC
Val
>WENV183244842
OLRE01000524
175842
Bacillota
CAC
Val
>WENV183245003
OLRE01000929
348419
Bacillota
GTT
Asn
>WENV183245001
OLRE01000929
348419
Bacillota
GTT
Asn
>WENV183244729
OLRE01000305
184497
Bacillota
GGG
Pro
>WENV183245108
OLRE01001359
184497
Bacillota
GGG
Pro
>WENV183245229
OLRE01001960
184497
Bacillota
GGG
Pro
>WENV183245365
OLRE01002762
184497
Bacillota
GGG
Pro
>WENV183245695
OLRE01009281
184497
Bacillota
GGG
Pro
>WENV183245746
OLRE01011228
184497
Bacillota
GGG
Pro
>WENV183245961
OLRE01030005
184497
Bacillota
GGG
Pro
>WENV183246039
OLRE01046537
194260
Bacillota
GAT
Ile
>WENV183244705
OLRE01000292
179176
Bacillota
ACG
Arg
>WENV183245784
OLRE01013205
352588
Bacillota
CAT
Met
>WENV183245750
OLRE01011408
229487
Bacillota
GTC
Asp
>WENV183245803
OLRE01014038
141334
Bacillota
TAG
Leu
>WENV183245227
OLRE01001951
190476
Bacillota
CAT
Met
>WENV183244962
OLRE01000807
190476
Bacillota
CAT
Met
>WENV183244389
OLRE01000007
73664
Bacillota
CAG
Leu
>WENV183245483
OLRE01003754
280447
Bacillota
GAC
Val
>WENV183245457
OLRE01003526
280447
Bacillota
GAC
Val
>WENV183245208
OLRE01001837
280447
Bacillota
GAC
Val
>WENV183245563
OLRE01005384
5692
Bacillota
GCT
Ser
>WENV183245187
OLRE01001745
5692
Bacillota
GCT
Ser
>WENV183245731
OLRE01010854
73009
Bacillota
CAG
Leu
>WENV183245415
OLRE01003107
73009
Bacillota
CAG
Leu
>WENV183245222
OLRE01001926
73009
Bacillota
CAG
Leu
>WENV183245369
OLRE01002795
481217
Bacillota
GCA
Cys
>WENV183244835
OLRE01000498
481217
Bacillota
GCA
Cys
>WENV183245436
OLRE01003381
407726
Bacillota
CTG
Gln
>WENV183245475
OLRE01003638
291581
Bacillota
CGG
Pro
>WENV183245099
OLRE01001309
291581
Bacillota
CGG
Pro
>WENV183245220
OLRE01001926
175859
Bacillota
TCT
Arg
>WENV183245112
OLRE01001373
175859
Bacillota
TCT
Arg
>WENV183245836
OLRE01016226
280436
Bacillota
TGC
Ala
>WENV183245392
OLRE01002920
290325
Bacillota
GCC
Gly
>WENV183244662
OLRE01000244
21311
Bacillota
GCT
Ser
>WENV183245025
OLRE01001019
175831
Bacillota
ACG
Arg
>WENV183244684
OLRE01000270
179810
Bacillota
TCT
Arg
>WENV183244573
OLRE01000141
284627
Bacillota
GAA
Phe
>WENV183245885
OLRE01019979
484885
Bacillota
TCC
Gly
>WENV183245543
OLRE01004871
480322
Bacillota
CTG
Gln
>WENV183245474
OLRE01003638
480322
Bacillota
CTG
Gln
>WENV183245098
OLRE01001309
480322
Bacillota
CTG
Gln
>WENV183244839
OLRE01000517
480322
Bacillota
CTG
Gln
>WENV183245055
OLRE01001130
480322
Bacillota
CTG
Gln
>WENV183244872
OLRE01000579
401685
Bacillota
TTG
Gln
>WENV183245721
OLRE01010350
175868
Bacillota
GTT
Asn
>WENV183245586
OLRE01005926
175868
Bacillota
GTT
Asn
>WENV183245556
OLRE01005193
175868
Bacillota
GTT
Asn
>WENV183245380
OLRE01002840
175868
Bacillota
GTT
Asn
>WENV183245325
OLRE01002462
322848
Bacillota
CTT
Lys
>WENV183245585
OLRE01005926
398854
Bacillota
CTC
Glu
>WENV183245379
OLRE01002840
398854
Bacillota
CTC
Glu
>WENV183245300
OLRE01002308
291576
Bacillota
CCC
Gly
>WENV183245102
OLRE01001319
291576
Bacillota
CCC
Gly
>WENV183245403
OLRE01002991
480324
Bacillota
TTG
Gln
>WENV183245097
OLRE01001309
480324
Bacillota
TTG
Gln
>WENV183245542
OLRE01004826
497729
Bacillota
CCA
Trp
>WENV183245498
OLRE01004200
497729
Bacillota
CCA
Trp
>WENV183245312
OLRE01002412
497729
Bacillota
CCA
Trp
>WENV183245292
OLRE01002292
497729
Bacillota
CCA
Trp
>WENV183244943
OLRE01000748
303718
Bacillota
TGT
Thr
>WENV183245552
OLRE01005025
73638
Bacillota
AAG
Leu
>WENV183245761
OLRE01011944
323864
Bacillota
TGC
Ala
>WENV183245079
OLRE01001192
398857
Bacillota
TTC
Glu
>WENV183245002
OLRE01000929
398857
Bacillota
TTC
Glu
>WENV183245138
OLRE01001465
204381
Bacillota
GAT
Ile
>WENV183245453
OLRE01003501
280444
Bacillota
GGT
Thr
>WENV183245452
OLRE01003501
280444
Bacillota
GGT
Thr
>WENV183245309
OLRE01002402
280444
Bacillota
GGT
Thr
>WENV183245192
OLRE01001778
280444
Bacillota
GGT
Thr
>WENV183245191
OLRE01001778
280444
Bacillota
GGT
Thr
>WENV183245036
OLRE01001067
280444
Bacillota
GGT
Thr
>WENV183245802
OLRE01014038
354380
Bacillota
TTT
Lys
>WENV183245879
OLRE01019564
179755
Bacillota
CCG
Arg
>WENV183245818
OLRE01014535
179755
Bacillota
CCG
Arg
>WENV183245462
OLRE01003567
179755
Bacillota
CCG
Arg
>WENV183245039
OLRE01001080
179755
Bacillota
CCG
Arg
>WENV183245757
OLRE01011796
58120
Bacillota
AAG
Leu
>WENV183245650
OLRE01007669
58120
Bacillota
AAG
Leu
>WENV183245524
OLRE01004548
58120
Bacillota
AAG
Leu
>WENV183245505
OLRE01004309
58120
Bacillota
AAG
Leu
>WENV183246036
OLRE01046076
46835
Bacillota
TAA
Leu
>WENV183244963
OLRE01000807
398832
Bacillota
TTC
Glu
>WENV183245228
OLRE01001951
398832
Bacillota
TTC
Glu
>WENV183244987
OLRE01000902
118669
Bacillota
GTA
Tyr
>WENV183245445
OLRE01003488
280476
Bacillota
TTT
Lys
>WENV183246060
OLRE01053880
332651
Bacillota
GTT
Asn
>WENV183244503
OLRE01000079
398852
Bacillota
CTC
Glu
>WENV183244502
OLRE01000079
398852
Bacillota
CTC
Glu
>WENV183244501
OLRE01000079
398852
Bacillota
CTC
Glu
>WENV183245480
OLRE01003653
309916
Bacillota
TTT
Lys
>WENV183245871
OLRE01019166
201856
Bacillota
GAT
Ile
>WENV183244649
OLRE01000224
280483
Bacillota
GAA
Phe
>WENV183245295
OLRE01002302
298260
Bacillota
GTT
Asn
>WENV183245861
OLRE01018324
285601
Bacillota
TTC
Glu
>WENV183245649
OLRE01007666
285601
Bacillota
TTC
Glu
>WENV183244685
OLRE01000270
175857
Bacillota
GTG
His
>WENV183244650
OLRE01000224
285756
Bacillota
GCC
Gly
>WENV183244919
OLRE01000692
398833
Bacillota
TGT
Thr
>WENV183244612
OLRE01000191
285556
Bacillota
TGT
Thr
>WENV183245451
OLRE01003501
175849
Bacillota
GTC
Asp
>WENV183245308
OLRE01002402
175849
Bacillota
GTC
Asp
>WENV183245190
OLRE01001778
175849
Bacillota
GTC
Asp
>WENV183244827
OLRE01000491
175849
Bacillota
GTC
Asp
>WENV183246040
OLRE01047240
221052
Bacillota
CAT
Met
>WENV183246041
OLRE01047240
282751
Bacillota
TGC
Ala
>WENV183245562
OLRE01005384
56074
Bacillota
TGA
Ser
>WENV183245186
OLRE01001745
56074
Bacillota
TGA
Ser
>WENV183245900
OLRE01021287
280473
Bacillota
TGG
Pro
>WENV183245776
OLRE01012724
280473
Bacillota
TGG
Pro
>WENV183245182
OLRE01001720
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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