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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
89 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183277290
OLSA01000374
510477
Bacillota
TCC
Gly
>WENV183278027
OLSA01005329
99852
Bacillota
GTA
Tyr
>WENV183278470
OLSA01019190
99852
Bacillota
GTA
Tyr
>WENV183277936
OLSA01003972
343590
Bacillota
GCC
Gly
>WENV183277866
OLSA01003488
349107
Bacillota
GCC
Gly
>WENV183277870
OLSA01003488
349107
Bacillota
GCC
Gly
>WENV183277306
OLSA01000413
238915
Bacillota
CAT
Met
>WENV183278196
OLSA01008706
405363
Bacillota
GCA
Cys
>WENV183278343
OLSA01012762
290391
Bacillota
TAC
Val
>WENV183277869
OLSA01003488
280428
Bacillota
GAA
Phe
>WENV183278642
OLSA01030961
179917
Bacillota
CAT
Met
>WENV183277867
OLSA01003488
280466
Bacillota
TAC
Val
>WENV183277911
OLSA01003850
280492
Bacillota
CTT
Lys
>WENV183278400
OLSA01014983
175842
Bacillota
CAC
Val
>WENV183277602
OLSA01001615
175842
Bacillota
CAC
Val
>WENV183277517
OLSA01001252
323166
Bacillota
TAC
Val
>WENV183278154
OLSA01007677
184497
Bacillota
GGG
Pro
>WENV183278787
OLSA01049537
179563
Bacillota
GAT
Ile
>WENV183277477
OLSA01001048
179176
Bacillota
ACG
Arg
>WENV183277259
OLSA01000300
295166
Bacillota
TGC
Ala
>WENV183278029
OLSA01005378
190476
Bacillota
CAT
Met
>WENV183277706
OLSA01002391
190476
Bacillota
CAT
Met
>WENV183278062
OLSA01006122
82124
Bacillota
TAA
Leu
>WENV183278498
OLSA01020348
280447
Bacillota
GAC
Val
>WENV183278460
OLSA01018460
280447
Bacillota
GAC
Val
>WENV183278139
OLSA01007561
280447
Bacillota
GAC
Val
>WENV183278015
OLSA01005088
280447
Bacillota
GAC
Val
>WENV183277962
OLSA01004342
280447
Bacillota
GAC
Val
>WENV183278081
OLSA01006396
5692
Bacillota
GCT
Ser
>WENV183277873
OLSA01003564
5692
Bacillota
GCT
Ser
>WENV183277539
OLSA01001329
186123
Bacillota
GTC
Asp
>WENV183277198
OLSA01000169
175825
Bacillota
GAT
Ile
>WENV183278284
OLSA01010730
73009
Bacillota
CAG
Leu
>WENV183278242
OLSA01009809
73009
Bacillota
CAG
Leu
>WENV183278195
OLSA01008694
189473
Bacillota
GAT
Ile
>WENV183277578
OLSA01001508
291581
Bacillota
CGG
Pro
>WENV183277814
OLSA01003122
175859
Bacillota
TCT
Arg
>WENV183277656
OLSA01001954
175831
Bacillota
ACG
Arg
>WENV183278786
OLSA01049537
353153
Bacillota
TGC
Ala
>WENV183277540
OLSA01001329
291634
Bacillota
GAA
Phe
>WENV183277245
OLSA01000270
346451
Bacillota
TTT
Lys
>WENV183278056
OLSA01006037
480322
Bacillota
CTG
Gln
>WENV183277652
OLSA01001947
480322
Bacillota
CTG
Gln
>WENV183277577
OLSA01001508
480322
Bacillota
CTG
Gln
>WENV183278515
OLSA01021234
175868
Bacillota
GTT
Asn
>WENV183278186
OLSA01008352
175868
Bacillota
GTT
Asn
>WENV183277616
OLSA01001735
175868
Bacillota
GTT
Asn
>WENV183278913
OLSA01078938
314834
Bacillota
TGC
Ala
>WENV183278514
OLSA01021234
398854
Bacillota
CTC
Glu
>WENV183278185
OLSA01008352
398854
Bacillota
CTC
Glu
>WENV183278188
OLSA01008412
291576
Bacillota
CCC
Gly
>WENV183278784
OLSA01049095
480324
Bacillota
TTG
Gln
>WENV183278432
OLSA01016492
497729
Bacillota
CCA
Trp
>WENV183278445
OLSA01017453
303718
Bacillota
TGT
Thr
>WENV183277860
OLSA01003444
303718
Bacillota
TGT
Thr
>WENV183277471
OLSA01001030
303718
Bacillota
TGT
Thr
>WENV183278744
OLSA01041281
73638
Bacillota
AAG
Leu
>WENV183277178
OLSA01000144
56079
Bacillota
AAG
Leu
>WENV183278552
OLSA01023518
323864
Bacillota
TGC
Ala
>WENV183277474
OLSA01001042
398857
Bacillota
TTC
Glu
>WENV183277179
OLSA01000145
398857
Bacillota
TTC
Glu
>WENV183277569
OLSA01001461
204381
Bacillota
GAT
Ile
>WENV183278229
OLSA01009393
117745
Bacillota
GTA
Tyr
>WENV183277223
OLSA01000217
317482
Bacillota
TAC
Val
>WENV183277740
OLSA01002655
483485
Bacillota
CCC
Gly
>WENV183278391
OLSA01014668
223045
Bacillota
GAT
Ile
>WENV183278516
OLSA01021533
179755
Bacillota
CCG
Arg
>WENV183278375
OLSA01013815
179755
Bacillota
CCG
Arg
>WENV183278335
OLSA01012507
179755
Bacillota
CCG
Arg
>WENV183277797
OLSA01002905
179755
Bacillota
CCG
Arg
>WENV183278303
OLSA01011261
46835
Bacillota
TAA
Leu
>WENV183277895
OLSA01003743
330413
Bacillota
CTT
Lys
>WENV183278030
OLSA01005378
398832
Bacillota
TTC
Glu
>WENV183277707
OLSA01002391
398832
Bacillota
TTC
Glu
>WENV183277584
OLSA01001518
280462
Bacillota
GAA
Phe
>WENV183277502
OLSA01001163
398852
Bacillota
CTC
Glu
>WENV183278940
OLSA01089311
201856
Bacillota
GAT
Ile
>WENV183277321
OLSA01000453
289123
Bacillota
GGT
Thr
>WENV183278263
OLSA01010206
285601
Bacillota
TTC
Glu
>WENV183277689
OLSA01002222
285601
Bacillota
TTC
Glu
>WENV183277655
OLSA01001952
398833
Bacillota
TGT
Thr
>WENV183278972
OLSA01103450
285556
Bacillota
TGT
Thr
>WENV183277868
OLSA01003488
175849
Bacillota
GTC
Asp
>WENV183278274
OLSA01010568
179166
Bacillota
TCT
Arg
>WENV183277188
OLSA01000151
405393
Bacillota
GCC
Gly
>WENV183278080
OLSA01006396
56074
Bacillota
TGA
Ser
>WENV183277872
OLSA01003564
56074
Bacillota
TGA
Ser
>WENV183278359
OLSA01013157
280473
Bacillota
TGG
Pro
>WENV183277818
OLSA01003156
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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