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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183304522
OLSQ01059883
99852
Bacillota
GTA
Tyr
>WENV183303653
OLSQ01004376
343590
Bacillota
GCC
Gly
>WENV183303654
OLSQ01004376
343590
Bacillota
GCC
Gly
>WENV183304439
OLSQ01044735
280500
Bacillota
TGC
Ala
>WENV183304109
OLSQ01016386
405363
Bacillota
GCA
Cys
>WENV183303467
OLSQ01002387
291579
Bacillota
GAA
Phe
>WENV183303551
OLSQ01003188
175842
Bacillota
CAC
Val
>WENV183303178
OLSQ01000619
348419
Bacillota
GTT
Asn
>WENV183303224
OLSQ01000718
184497
Bacillota
GGG
Pro
>WENV183304275
OLSQ01025746
179563
Bacillota
GAT
Ile
>WENV183304023
OLSQ01012569
352588
Bacillota
CAT
Met
>WENV183302724
OLSQ01000019
295166
Bacillota
TGC
Ala
>WENV183303553
OLSQ01003191
190476
Bacillota
CAT
Met
>WENV183303595
OLSQ01003694
73664
Bacillota
CAG
Leu
>WENV183303408
OLSQ01001784
73664
Bacillota
CAG
Leu
>WENV183304002
OLSQ01011375
280447
Bacillota
GAC
Val
>WENV183303771
OLSQ01006012
280447
Bacillota
GAC
Val
>WENV183303384
OLSQ01001602
5692
Bacillota
GCT
Ser
>WENV183303325
OLSQ01001208
186123
Bacillota
GTC
Asp
>WENV183302999
OLSQ01000295
186123
Bacillota
GTC
Asp
>WENV183302963
OLSQ01000230
186123
Bacillota
GTC
Asp
>WENV183304598
OLSQ01082246
175825
Bacillota
GAT
Ile
>WENV183303364
OLSQ01001490
284723
Bacillota
TAC
Val
>WENV183303561
OLSQ01003276
73009
Bacillota
CAG
Leu
>WENV183304048
OLSQ01013570
481217
Bacillota
GCA
Cys
>WENV183304235
OLSQ01022977
189473
Bacillota
GAT
Ile
>WENV183303988
OLSQ01010711
291581
Bacillota
CGG
Pro
>WENV183303878
OLSQ01008012
291581
Bacillota
CGG
Pro
>WENV183303540
OLSQ01003030
291581
Bacillota
CGG
Pro
>WENV183303745
OLSQ01005470
175859
Bacillota
TCT
Arg
>WENV183303702
OLSQ01004845
175831
Bacillota
ACG
Arg
>WENV183304274
OLSQ01025746
353153
Bacillota
TGC
Ala
>WENV183303326
OLSQ01001208
291634
Bacillota
GAA
Phe
>WENV183303000
OLSQ01000295
291634
Bacillota
GAA
Phe
>WENV183303001
OLSQ01000295
346451
Bacillota
TTT
Lys
>WENV183304334
OLSQ01032148
184121
Bacillota
TGG
Pro
>WENV183304038
OLSQ01013008
480322
Bacillota
CTG
Gln
>WENV183303987
OLSQ01010711
480322
Bacillota
CTG
Gln
>WENV183303877
OLSQ01008012
480322
Bacillota
CTG
Gln
>WENV183303643
OLSQ01004283
480322
Bacillota
CTG
Gln
>WENV183303539
OLSQ01003030
480322
Bacillota
CTG
Gln
>WENV183304293
OLSQ01027172
175868
Bacillota
GTT
Asn
>WENV183303990
OLSQ01010762
175868
Bacillota
GTT
Asn
>WENV183303928
OLSQ01009174
175868
Bacillota
GTT
Asn
>WENV183303895
OLSQ01008192
175868
Bacillota
GTT
Asn
>WENV183304395
OLSQ01038765
314834
Bacillota
TGC
Ala
>WENV183304292
OLSQ01027172
398854
Bacillota
CTC
Glu
>WENV183303989
OLSQ01010762
398854
Bacillota
CTC
Glu
>WENV183303927
OLSQ01009174
398854
Bacillota
CTC
Glu
>WENV183303894
OLSQ01008192
398854
Bacillota
CTC
Glu
>WENV183303985
OLSQ01010582
291576
Bacillota
CCC
Gly
>WENV183303968
OLSQ01010277
291576
Bacillota
CCC
Gly
>WENV183303742
OLSQ01005422
291576
Bacillota
CCC
Gly
>WENV183304066
OLSQ01014318
480324
Bacillota
TTG
Gln
>WENV183303416
OLSQ01001839
480324
Bacillota
TTG
Gln
>WENV183302912
OLSQ01000150
497729
Bacillota
CCA
Trp
>WENV183303362
OLSQ01001484
497729
Bacillota
CCA
Trp
>WENV183303495
OLSQ01002737
303718
Bacillota
TGT
Thr
>WENV183304373
OLSQ01035336
186051
Bacillota
GAT
Ile
>WENV183303179
OLSQ01000619
398857
Bacillota
TTC
Glu
>WENV183304030
OLSQ01012812
280444
Bacillota
GGT
Thr
>WENV183303683
OLSQ01004735
483485
Bacillota
CCC
Gly
>WENV183303943
OLSQ01009719
179755
Bacillota
CCG
Arg
>WENV183303861
OLSQ01007527
179755
Bacillota
CCG
Arg
>WENV183303778
OLSQ01006196
179755
Bacillota
CCG
Arg
>WENV183303447
OLSQ01002220
58120
Bacillota
AAG
Leu
>WENV183303075
OLSQ01000365
58120
Bacillota
AAG
Leu
>WENV183303170
OLSQ01000595
46835
Bacillota
TAA
Leu
>WENV183304472
OLSQ01049746
398832
Bacillota
TTC
Glu
>WENV183303554
OLSQ01003191
398832
Bacillota
TTC
Glu
>WENV183303056
OLSQ01000355
52748
Bacillota
TGA
Ser
>WENV183304587
OLSQ01078076
201856
Bacillota
GAT
Ile
>WENV183302968
OLSQ01000232
289123
Bacillota
GGT
Thr
>WENV183302707
OLSQ01000013
184539
Bacillota
TCT
Arg
>WENV183302922
OLSQ01000159
285756
Bacillota
GCC
Gly
>WENV183302692
OLSQ01000007
285756
Bacillota
GCC
Gly
>WENV183304541
OLSQ01063819
398833
Bacillota
TGT
Thr
>WENV183303829
OLSQ01007170
288989
Bacillota
TAC
Val
>WENV183303327
OLSQ01001208
405393
Bacillota
GCC
Gly
>WENV183302964
OLSQ01000230
405393
Bacillota
GCC
Gly
>WENV183302845
OLSQ01000098
405393
Bacillota
GCC
Gly
>WENV183303383
OLSQ01001602
56074
Bacillota
TGA
Ser
>WENV183303836
OLSQ01007265
280473
Bacillota
TGG
Pro
>WENV183303756
OLSQ01005778
280473
Bacillota
TGG
Pro
>WENV183303608
OLSQ01003842
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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