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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183367809
OLXQ01048107
179231
Actinomycetota
TAC
Val
>WENV183367570
OLXQ01004630
175883
Actinomycetota
GAT
Ile
>WENV183367511
OLXQ01002160
280498
Actinomycetota
GTT
Asn
>WENV183367747
OLXQ01029414
280503
Actinomycetota
CCT
Arg
>WENV183367592
OLXQ01006134
459899
Actinomycetota
TTC
Glu
>WENV183367469
OLXQ01000940
447337
Actinomycetota
GAC
Val
>WENV183367386
OLXQ01000045
280441
Actinomycetota
CCG
Arg
>WENV183367485
OLXQ01001506
280524
Actinomycetota
TGC
Ala
>WENV183367486
OLXQ01001506
280523
Actinomycetota
GGC
Ala
>WENV183367629
OLXQ01009106
20205
Actinomycetota
GCT
Ser
>WENV183367509
OLXQ01002084
280450
Actinomycetota
TTT
Lys
>WENV183367464
OLXQ01000903
480329
Actinomycetota
CCC
Gly
>WENV183367696
OLXQ01018922
175882
Actinomycetota
TGG
Pro
>WENV183367512
OLXQ01002205
222475
Actinomycetota
CTT
Lys
>WENV183367413
OLXQ01000309
280489
Actinomycetota
CTC
Glu
>WENV183367406
OLXQ01000217
297606
Actinomycetota
CCT
Arg
>WENV183367414
OLXQ01000309
398853
Actinomycetota
CTG
Gln
>WENV183367634
OLXQ01009701
203883
Actinomycetota
TCT
Arg
>WENV183367389
OLXQ01000099
104211
Actinomycetota
CAG
Leu
>WENV183367397
OLXQ01000146
56071
Actinomycetota
TGA
Ser
>WENV183367616
OLXQ01007796
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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