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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183390397
OLZB01039676
99852
Bacillota
GTA
Tyr
>WENV183390127
OLZB01008076
349107
Bacillota
GCC
Gly
>WENV183390128
OLZB01008076
405363
Bacillota
GCA
Cys
>WENV183389517
OLZB01000070
424998
Bacillota
GCC
Gly
>WENV183389584
OLZB01000146
280492
Bacillota
CTT
Lys
>WENV183389725
OLZB01000411
280492
Bacillota
CTT
Lys
>WENV183390191
OLZB01011915
175842
Bacillota
CAC
Val
>WENV183390351
OLZB01026844
236579
Bacillota
GAT
Ile
>WENV183390258
OLZB01015613
184497
Bacillota
GGG
Pro
>WENV183390235
OLZB01013838
406553
Bacillota
TTG
Gln
>WENV183390350
OLZB01026844
295166
Bacillota
TGC
Ala
>WENV183390123
OLZB01008040
190476
Bacillota
CAT
Met
>WENV183389493
OLZB01000056
73664
Bacillota
CAG
Leu
>WENV183389649
OLZB01000222
359682
Bacillota
TAC
Val
>WENV183390042
OLZB01004867
175825
Bacillota
GAT
Ile
>WENV183389904
OLZB01001743
73009
Bacillota
CAG
Leu
>WENV183389891
OLZB01001527
73009
Bacillota
CAG
Leu
>WENV183389803
OLZB01000685
189473
Bacillota
GAT
Ile
>WENV183390145
OLZB01009135
291581
Bacillota
CGG
Pro
>WENV183389991
OLZB01003447
175859
Bacillota
TCT
Arg
>WENV183389963
OLZB01002835
398835
Bacillota
GCC
Gly
>WENV183390041
OLZB01004867
280436
Bacillota
TGC
Ala
>WENV183389853
OLZB01001144
175831
Bacillota
ACG
Arg
>WENV183389900
OLZB01001732
27216
Bacillota
GCT
Ser
>WENV183390134
OLZB01008620
480322
Bacillota
CTG
Gln
>WENV183390018
OLZB01004246
480322
Bacillota
CTG
Gln
>WENV183389819
OLZB01000791
322848
Bacillota
CTT
Lys
>WENV183390226
OLZB01013495
291576
Bacillota
CCC
Gly
>WENV183389828
OLZB01000928
291576
Bacillota
CCC
Gly
>WENV183390048
OLZB01004900
480324
Bacillota
TTG
Gln
>WENV183390090
OLZB01006558
497729
Bacillota
CCA
Trp
>WENV183390147
OLZB01009252
407858
Bacillota
GCC
Gly
>WENV183389504
OLZB01000064
175899
Bacillota
GTC
Asp
>WENV183389492
OLZB01000056
56079
Bacillota
AAG
Leu
>WENV183390081
OLZB01006339
175911
Bacillota
GTC
Asp
>WENV183389715
OLZB01000390
117745
Bacillota
GTA
Tyr
>WENV183390192
OLZB01011962
280444
Bacillota
GGT
Thr
>WENV183390297
OLZB01019986
317482
Bacillota
TAC
Val
>WENV183390016
OLZB01004206
223045
Bacillota
GAT
Ile
>WENV183389952
OLZB01002559
179755
Bacillota
CCG
Arg
>WENV183390124
OLZB01008040
398832
Bacillota
TTC
Glu
>WENV183389579
OLZB01000130
398852
Bacillota
CTC
Glu
>WENV183389704
OLZB01000353
398852
Bacillota
CTC
Glu
>WENV183389724
OLZB01000404
398852
Bacillota
CTC
Glu
>WENV183390362
OLZB01029502
280483
Bacillota
GAA
Phe
>WENV183389511
OLZB01000064
175857
Bacillota
GTG
His
>WENV183390363
OLZB01029502
285756
Bacillota
GCC
Gly
>WENV183389896
OLZB01001653
398833
Bacillota
TGT
Thr
>WENV183389513
OLZB01000064
280463
Bacillota
TTT
Lys
>WENV183389869
OLZB01001368
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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