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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183508792
OMHF01004325
175904
Bacteroidota
CGG
Pro
>WENV183508870
OMHF01010908
400161
Bacteroidota
GGT
Thr
>WENV183508891
OMHF01013007
431429
Bacteroidota
CCT
Arg
>WENV183508908
OMHF01013964
30327
Bacteroidota
GCT
Ser
>WENV183508822
OMHF01007374
147839
Bacteroidota
CAG
Leu
>WENV183508890
OMHF01012905
187105
Bacteroidota
CAT
Met
>WENV183508729
OMHF01001051
46648
Bacteroidota
TAA
Leu
>WENV183508816
OMHF01006739
228499
Bacteroidota
GTG
His
>WENV183508772
OMHF01003350
280478
Bacteroidota
GCC
Gly
>WENV183508800
OMHF01005201
228511
Bacteroidota
GAT
Ile
>WENV183508741
OMHF01001696
21008
Bacteroidota
GGA
Ser
>WENV183508847
OMHF01009176
187814
Bacteroidota
GTC
Asp
>WENV183508750
OMHF01002092
118220
Bacteroidota
GTA
Tyr
>WENV183508874
OMHF01011336
481044
Bacteroidota
>WENV183508853
OMHF01010371
285750
Bacteroidota
CCC
Gly
>WENV183508704
OMHF01000361
188555
Bacteroidota
CAT
Met
>WENV183508823
OMHF01007374
73509
Bacteroidota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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