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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183575653
OOCI01004678
176499
Actinomycetota
CAT
Met
>WENV183576300
OOCI01073524
295964
Actinomycetota
GTT
Asn
>WENV183575613
OOCI01003976
56384
Actinomycetota
TGA
Ser
>WENV183575735
OOCI01006536
176075
Actinomycetota
TCT
Arg
>WENV183575696
OOCI01005569
59689
Actinomycetota
GGA
Ser
>WENV183576131
OOCI01032830
175837
Actinomycetota
ACG
Arg
>WENV183575692
OOCI01005499
24925
Actinomycetota
GCT
Ser
>WENV183575712
OOCI01005954
56383
Actinomycetota
CGA
Ser
>WENV183576209
OOCI01045189
280441
Actinomycetota
CCG
Arg
>WENV183575974
OOCI01016360
302133
Actinomycetota
CAC
Val
>WENV183576275
OOCI01062708
241064
Actinomycetota
CTC
Glu
>WENV183575507
OOCI01002668
280524
Actinomycetota
TGC
Ala
>WENV183576046
OOCI01024104
398948
Actinomycetota
TTC
Glu
>WENV183575652
OOCI01004678
117777
Actinomycetota
>WENV183575580
OOCI01003521
280523
Actinomycetota
GGC
Ala
>WENV183575545
OOCI01003050
227544
Actinomycetota
TAC
Val
>WENV183575747
OOCI01006866
175841
Actinomycetota
TAT
Ile
>WENV183575777
OOCI01007837
20415
Actinomycetota
GAG
Leu
>WENV183575456
OOCI01002102
140879
Actinomycetota
TAG
Leu
>WENV183575679
OOCI01005162
178569
Actinomycetota
CAT
Met
>WENV183575801
OOCI01008812
480329
Actinomycetota
CCC
Gly
>WENV183575426
OOCI01001925
99865
Actinomycetota
CAG
Leu
>WENV183575806
OOCI01008904
222475
Actinomycetota
CTT
Lys
>WENV183576017
OOCI01020170
280489
Actinomycetota
CTC
Glu
>WENV183576018
OOCI01020170
398853
Actinomycetota
CTG
Gln
>WENV183575912
OOCI01012308
175843
Actinomycetota
CAA
Leu
>WENV183575998
OOCI01018409
203883
Actinomycetota
TCT
Arg
>WENV183575990
OOCI01017592
46642
Actinomycetota
CGA
Ser
>WENV183575917
OOCI01012598
117903
Actinomycetota
GTA
Tyr
>WENV183575951
OOCI01015348
56071
Actinomycetota
TGA
Ser
>WENV183575579
OOCI01003521
506175
Actinomycetota
TTG
Gln
>WENV183575455
OOCI01002102
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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