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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
Diversity of active microbial communities in surface seawaters along a north-south transect in the South Pacific Ocean (SRP001207)
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>SRA1016560
SRR027217.1457
Diversity of active microbial communities in surface seawaters along a north-south transect in the South Pacific Ocean (SRP001207)
152
228
+
Pro
TGG
[SRA]
>SRA1016561
SRR027217.1650
Diversity of active microbial communities in surface seawaters along a north-south transect in the South Pacific Ocean (SRP001207)
152
228
+
Pro
TGG
[SRA]
>SRA1016562
SRR027217.1684
Diversity of active microbial communities in surface seawaters along a north-south transect in the South Pacific Ocean (SRP001207)
151
227
+
Pro
TGG
[SRA]
>SRA1016563
SRR027217.1758
Diversity of active microbial communities in surface seawaters along a north-south transect in the South Pacific Ocean (SRP001207)
152
228
+
Pro
TGG
[SRA]
>SRA1016564
SRR027217.1931
Diversity of active microbial communities in surface seawaters along a north-south transect in the South Pacific Ocean (SRP001207)
142
218
+
Met
CAT
[SRA]
>SRA1016565
SRR027217.1945
Diversity of active microbial communities in surface seawaters along a north-south transect in the South Pacific Ocean (SRP001207)
154
230
+
Pro
TGG
[SRA]
>SRA1016566
SRR027217.2080
Diversity of active microbial communities in surface seawaters along a north-south transect in the South Pacific Ocean (SRP001207)
151
227
+
Pro
TGG
[SRA]
>SRA1016567
SRR027217.2229
Diversity of active microbial communities in surface seawaters along a north-south transect in the South Pacific Ocean (SRP001207)
152
228
+
Pro
TGG
[SRA]
>SRA1016568
SRR027217.2360
Diversity of active microbial communities in surface seawaters along a north-south transect in the South Pacific Ocean (SRP001207)
153
229
+
Pro
TGG
[SRA]
>SRA1016569
SRR027217.2494
Diversity of active microbial communities in surface seawaters along a north-south transect in the South Pacific Ocean (SRP001207)
152
228
+
Pro
TGG
[SRA]
>SRA1016570
SRR027217.2511
Diversity of active microbial communities in surface seawaters along a north-south transect in the South Pacific Ocean (SRP001207)
152
228
+
Pro
TGG
[SRA]
>SRA1016571
SRR027217.2533
Diversity of active microbial communities in surface seawaters along a north-south transect in the South Pacific Ocean (SRP001207)
153
229
+
Pro
TGG
[SRA]
>SRA1016572
SRR027217.2626
Diversity of active microbial communities in surface seawaters along a north-south transect in the South Pacific Ocean (SRP001207)
152
228
+
Pro
TGG
[SRA]
>SRA1016573
SRR027217.2669
Diversity of active microbial communities in surface seawaters along a north-south transect in the South Pacific Ocean (SRP001207)
152
228
+
Pro
TGG
[SRA]
>SRA1016574
SRR027217.2805
Diversity of active microbial communities in surface seawaters along a north-south transect in the South Pacific Ocean (SRP001207)
152
228
+
Pro
TGG
[SRA]
>SRA1016558
SRR027217.409
Diversity of active microbial communities in surface seawaters along a north-south transect in the South Pacific Ocean (SRP001207)
152
228
+
Pro
TGG
[SRA]
>SRA1016559
SRR027217.884
Diversity of active microbial communities in surface seawaters along a north-south transect in the South Pacific Ocean (SRP001207)
152
228
+
Pro
TGG
[SRA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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