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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.10733 (258 seq.)
>W1710923915
LOCN01000004
Gammaproteobacteria
Moritella sp. JT01 [LOCN]
20765
20674
-
Ser
GCT
[ENA]
¡û
>W1710923922
LOCN01000004
Gammaproteobacteria
Moritella sp. JT01 [LOCN]
19718
19627
-
Ser
GCT
[ENA]
¡û
>W1711027096
LRDC01000029
Gammaproteobacteria
Shewanella frigidimarina [LRDC]
38246
38155
-
Ser
GCT
[ENA]
¡û
>W1711027100
LRDC01000029
Gammaproteobacteria
Shewanella frigidimarina [LRDC]
37838
37747
-
Ser
GCT
[ENA]
¡û
>W1711174289
LWED01000006
Gammaproteobacteria
Shewanella baltica [LWED]
258
167
-
Ser
GCT
[ENA]
¡û
>W1711174297
LWED01000014
Gammaproteobacteria
Shewanella baltica [LWED]
117850
117759
-
Ser
GCT
[ENA]
¡û
>W1711326724
MBFW01000064
Gammaproteobacteria
Shewanella algae [MBFW]
94604
94513
-
Ser
GCT
[ENA]
¡û
>W1711360891
MDKA01000050
Gammaproteobacteria
Shewanella algae [MDKA]
25893
25984
+
Ser
GCT
[ENA]
¡û
>W1711621533
MPDF01000008
Gammaproteobacteria
Gammaproteobacteria bacterium MedPE [MPDF]
6208
6117
-
Ser
GCT
[ENA]
¡û
>W1711621613
MPDG02000002
Gammaproteobacteria
Shewanella sp. SACH [MPDG]
882824
882915
+
Ser
GCT
[ENA]
¡û
>W1711934401
NAJR01000003
Gammaproteobacteria
Shewanella sp. Shew256 [NAJR]
25236
25145
-
Ser
GCT
[ENA]
¡û
>W1711934405
NAJR01000003
Gammaproteobacteria
Shewanella sp. Shew256 [NAJR]
24749
24658
-
Ser
GCT
[ENA]
¡û
>W1712080437
NGZL01000012
Gammaproteobacteria
Shewanella putrefaciens [NGZL]
35104
35195
+
Ser
GCT
[ENA]
¡û
>W1712080442
NGZL01000012
Gammaproteobacteria
Shewanella putrefaciens [NGZL]
35711
35802
+
Ser
GCT
[ENA]
¡û
>W131179770
ARMR01000024
Gammaproteobacteria
Moritella marina ATCC 15381 [ARMR]
18866
18775
-
Ser
GCT
[ENA]
¡û
>W131179798
ARMR01000044
Gammaproteobacteria
Moritella marina ATCC 15381 [ARMR]
254
163
-
Ser
GCT
[ENA]
¡û
>C171108608
CP020472
Gammaproteobacteria
Shewanella japonica KCTC 22435 [CP020472]
3661493
3661402
-
Ser
GCT
-
¡û
>C171108612
CP020472
Gammaproteobacteria
Shewanella japonica KCTC 22435 [CP020472]
3661078
3660987
-
Ser
GCT
-
¡û
>WENV013003
AACY020356171
Marine microbial communities from Global Ocean Sampling (GOS)
6769
6676
-
Ser
GCT
[ENA]
>WENV013009
AACY020356171
Marine microbial communities from Global Ocean Sampling (GOS)
7498
7405
-
Ser
GCT
[ENA]
>C019777
CP000507
Gammaproteobacteria
Shewanella amazonensis SB2B [CP000507]
1271639
1271730
+
Ser
GCT
[Ensembl]
¡û
>C019783
CP000507
Gammaproteobacteria
Shewanella amazonensis SB2B [CP000507]
1272281
1272372
+
Ser
GCT
[Ensembl]
¡û
>C020679
CP000563
Gammaproteobacteria
Shewanella baltica OS155 [CP000563]
3645208
3645117
-
Ser
GCT
[Ensembl]
¡û
>C020685
CP000563
Gammaproteobacteria
Shewanella baltica OS155 [CP000563]
3644438
3644347
-
Ser
GCT
[Ensembl]
¡û
>C022226
CP000469
Gammaproteobacteria
Shewanella sp. ANA-3 [CP000469]
1332641
1332732
+
Ser
GCT
[Ensembl]
¡û
>C022232
CP000469
Gammaproteobacteria
Shewanella sp. ANA-3 [CP000469]
1333369
1333460
+
Ser
GCT
[Ensembl]
¡û
>C022328
CP000446
Gammaproteobacteria
Shewanella sp. MR-4 [CP000446]
1327447
1327538
+
Ser
GCT
[Ensembl]
¡û
>C022334
CP000446
Gammaproteobacteria
Shewanella sp. MR-4 [CP000446]
1328179
1328270
+
Ser
GCT
[Ensembl]
¡û
>C022424
CP000444
Gammaproteobacteria
Shewanella sp. MR-7 [CP000444]
1403855
1403946
+
Ser
GCT
[Ensembl]
¡û
>C022430
CP000444
Gammaproteobacteria
Shewanella sp. MR-7 [CP000444]
1404587
1404678
+
Ser
GCT
[Ensembl]
¡û
>C022527
CP000503
Gammaproteobacteria
Shewanella sp. W3-18-1 [CP000503]
1445268
1445359
+
Ser
GCT
[Ensembl]
¡û
>C022533
CP000503
Gammaproteobacteria
Shewanella sp. W3-18-1 [CP000503]
1445999
1446090
+
Ser
GCT
[Ensembl]
¡û
>C022661
CP000606
Gammaproteobacteria
Shewanella loihica PV-4 [CP000606]
1416121
1416212
+
Ser
GCT
[Ensembl]
¡û
>C022666
CP000606
Gammaproteobacteria
Shewanella loihica PV-4 [CP000606]
1416665
1416756
+
Ser
GCT
[Ensembl]
¡û
>C022971
AE014299
Gammaproteobacteria
Shewanella oneidensis MR-1 [AE014299]
3567965
3567874
-
Ser
GCT
[Ensembl]
¡û
>C022977
AE014299
Gammaproteobacteria
Shewanella oneidensis MR-1 [AE014299]
3567232
3567141
-
Ser
GCT
[Ensembl]
¡û
>C023291
CP000681
Gammaproteobacteria
Shewanella putrefaciens [CP000681]
3176882
3176791
-
Ser
GCT
[Ensembl]
¡û
>C023297
CP000681
Gammaproteobacteria
Shewanella putrefaciens [CP000681]
3176151
3176060
-
Ser
GCT
[Ensembl]
¡û
>w026299
ABAU01000023
Gammaproteobacteria
Shewanella baltica OS223 [ABAU]
4111
4018
-
Ser
GCT
[ENA]
¡û
>w026293
ABAU01000023
Gammaproteobacteria
Shewanella baltica OS223 [ABAU]
4882
4789
-
Ser
GCT
[ENA]
¡û
>w024944
AAZC01000098
Gammaproteobacteria
Shewanella baltica OS185 [AAZC]
1156
1249
+
Ser
GCT
[ENA]
¡û
>w024938
AAZC01000098
Gammaproteobacteria
Shewanella baltica OS185 [AAZC]
385
478
+
Ser
GCT
[ENA]
¡û
>w022860
AAWY01000011
Gammaproteobacteria
Shewanella putrefaciens 200 [AAWY]
7139
7046
-
Ser
GCT
[ENA]
¡û
>w022854
AAWY01000011
Gammaproteobacteria
Shewanella putrefaciens 200 [AAWY]
7870
7777
-
Ser
GCT
[ENA]
¡û
>w021064
AAVJ01000001
Gammaproteobacteria
Shewanella pealeana ATCC 700345 [AAVJ]
299236
299143
-
Ser
GCT
[ENA]
¡û
>w021061
AAVJ01000001
Gammaproteobacteria
Shewanella pealeana ATCC 700345 [AAVJ]
299602
299509
-
Ser
GCT
[ENA]
¡û
>w021055
AAVJ01000001
Gammaproteobacteria
Shewanella pealeana ATCC 700345 [AAVJ]
300234
300141
-
Ser
GCT
[ENA]
¡û
>w018679
AATK01000097
Gammaproteobacteria
Shewanella baltica OS195 [AATK]
7195
7102
-
Ser
GCT
[ENA]
¡û
>w018673
AATK01000097
Gammaproteobacteria
Shewanella baltica OS195 [AATK]
7968
7875
-
Ser
GCT
[ENA]
¡û
>WENV180311268
OBJT01191778
[OBJT] soil metagenome; soil
241
150
-
Ser
GCT
[ENA]
¢þ
>W141171231
AXZL01000069
Gammaproteobacteria
Shewanella decolorationis S12 [AXZL]
987
896
-
Ser
GCT
[ENA]
¡û
>W141171233
AXZL01000069
Gammaproteobacteria
Shewanella decolorationis S12 [AXZL]
764
673
-
Ser
GCT
[ENA]
¡û
>C08008664
CP000753
Gammaproteobacteria
Shewanella baltica OS185 [CP000753]
3722587
3722499
-
Ser
GCT
[Ensembl]
¡û
>C08008670
CP000753
Gammaproteobacteria
Shewanella baltica OS185 [CP000753]
3721816
3721728
-
Ser
GCT
[Ensembl]
¡û
>W141227847
BALM01000011
Gammaproteobacteria
Shewanella marina JCM 15074 [BALM]
141936
142027
+
Ser
GCT
[ENA]
¡û
>W141227909
BALN01000018
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 [BALN]
82461
82552
+
Ser
GCT
[ENA]
¡û
>W141227920
BALN01000028
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 [BALN]
121
212
+
Ser
GCT
[ENA]
¡û
>W141227971
BALO01000022
Gammaproteobacteria
Shewanella algae JCM 21037 [BALO]
82508
82417
-
Ser
GCT
[ENA]
¡û
>W141227975
BALO01000040
Gammaproteobacteria
Shewanella algae JCM 21037 [BALO]
40253
40344
+
Ser
GCT
[ENA]
¡û
>C08010128
CP000851
Gammaproteobacteria
Shewanella pealeana ATCC 700345 [CP000851]
1456724
1456815
+
Ser
GCT
[Ensembl]
¡û
>C08010134
CP000851
Gammaproteobacteria
Shewanella pealeana ATCC 700345 [CP000851]
1457356
1457447
+
Ser
GCT
[Ensembl]
¡û
>C08010137
CP000851
Gammaproteobacteria
Shewanella pealeana ATCC 700345 [CP000851]
1457722
1457813
+
Ser
GCT
[Ensembl]
¡û
>C08008768
CP000891
Gammaproteobacteria
Shewanella baltica OS195 [CP000891]
3843448
3843360
-
Ser
GCT
[Ensembl]
¡û
>C08008774
CP000891
Gammaproteobacteria
Shewanella baltica OS195 [CP000891]
3842675
3842587
-
Ser
GCT
[Ensembl]
¡û
>C08009817
CP000931
Gammaproteobacteria
Shewanella halifaxensis HAW-EB4 [CP000931]
1503124
1503215
+
Ser
GCT
[Ensembl]
¡û
>C08009823
CP000931
Gammaproteobacteria
Shewanella halifaxensis HAW-EB4 [CP000931]
1503759
1503850
+
Ser
GCT
[Ensembl]
¡û
>C08009826
CP000931
Gammaproteobacteria
Shewanella halifaxensis HAW-EB4 [CP000931]
1504123
1504214
+
Ser
GCT
[Ensembl]
¡û
>W141276207
JADP01000016
Gammaproteobacteria
Shewanella sp. 38A_GOM-205m [JADP]
30114
30205
+
Ser
GCT
[ENA]
¡û
>W141276557
JADX01000006
Gammaproteobacteria
Shewanella fidelis ATCC BAA-318 [JADX]
98222
98313
+
Ser
GCT
[ENA]
¡û
>W141276558
JADX01000007
Gammaproteobacteria
Shewanella fidelis ATCC BAA-318 [JADX]
2
93
+
Ser
GCT
[ENA]
¡û
>W141277076
JAEH01000066
Gammaproteobacteria
Shewanella waksmanii ATCC BAA-643 [JAEH]
4238
4329
+
Ser
GCT
[ENA]
¡û
>W141277723
JAEU01000017
Gammaproteobacteria
Shewanella putrefaciens HRCR-6 [JAEU]
94
3
-
Ser
GCT
[ENA]
¡û
>WENV170022199
BCQK01001534
[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
352
443
+
Ser
GCT
[ENA]
¢þ
>WENV170022203
BCQK01001534
[BCQK] museum specimen metagenome; Liagora japonica specimen isolated from Nada, Gobou, Wakayama
757
848
+
Ser
GCT
[ENA]
¢þ
>WENV170782675
MAAC01011135
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
62708
62617
-
Ser
GCT
[ENA]
¢þ
>C181016852
CP015194
Gammaproteobacteria
Shewanella sp. Pdp11 [CP015194]
4160558
4160467
-
Ser
GCT
-
¡û
>C181016858
CP015194
Gammaproteobacteria
Shewanella sp. Pdp11 [CP015194]
4159787
4159696
-
Ser
GCT
-
¡û
>C181057559
CP022089
Gammaproteobacteria
Shewanella sp. FDAARGOS_354 [CP022089]
4898288
4898379
+
Ser
GCT
-
¡û
>C181057565
CP022089
Gammaproteobacteria
Shewanella sp. FDAARGOS_354 [CP022089]
4899019
4899110
+
Ser
GCT
-
¡û
>C181061334
CP022272
Gammaproteobacteria
Shewanella marisflavi EP1 [CP022272]
2993753
2993662
-
Ser
GCT
-
¡û
>C181061339
CP022272
Gammaproteobacteria
Shewanella marisflavi EP1 [CP022272]
2993205
2993114
-
Ser
GCT
-
¡û
>C181062994
CP022358
Gammaproteobacteria
Shewanella bicestrii JAB-1 [CP022358]
3436665
3436574
-
Ser
GCT
-
¡û
>C181063000
CP022358
Gammaproteobacteria
Shewanella bicestrii JAB-1 [CP022358]
3435936
3435845
-
Ser
GCT
-
¡û
>C181075013
CP023019
Gammaproteobacteria
Shewanella sp. WE21 [CP023019]
3299008
3299099
+
Ser
GCT
-
¡û
>C181075019
CP023019
Gammaproteobacteria
Shewanella sp. WE21 [CP023019]
3299780
3299871
+
Ser
GCT
-
¡û
>C181164561
CP028355
Gammaproteobacteria
Shewanella baltica CW2 [CP028355]
489031
488940
-
Ser
GCT
-
¡û
>C181164567
CP028355
Gammaproteobacteria
Shewanella baltica CW2 [CP028355]
488260
488169
-
Ser
GCT
-
¡û
>C181165416
CP028435
Gammaproteobacteria
Shewanella putrefaciens WS13 [CP028435]
3883223
3883314
+
Ser
GCT
-
¡û
>C181165422
CP028435
Gammaproteobacteria
Shewanella putrefaciens WS13 [CP028435]
3883954
3884045
+
Ser
GCT
-
¡û
>C181167930
CP028730
Gammaproteobacteria
Shewanella baltica 128 [CP028730]
3494076
3493985
-
Ser
GCT
-
¡û
>C181167936
CP028730
Gammaproteobacteria
Shewanella baltica 128 [CP028730]
3493305
3493214
-
Ser
GCT
-
¡û
>C191015575
CP018456
Gammaproteobacteria
Shewanella algae CCU101 [CP018456]
23517
23426
-
Ser
GCT
-
¡û
>C191015581
CP018456
Gammaproteobacteria
Shewanella algae CCU101 [CP018456]
22881
22790
-
Ser
GCT
-
¡û
>W141520100
JGVI01000072
Gammaproteobacteria
Shewanella xiamenensis [JGVI]
54450
54359
-
Ser
GCT
[ENA]
¡û
>W141520106
JGVI01000072
Gammaproteobacteria
Shewanella xiamenensis [JGVI]
53719
53628
-
Ser
GCT
[ENA]
¡û
>W09102782
AAIN01000008
Gammaproteobacteria
Shewanella amazonensis SB2B [AAIN]
96338
96429
+
Ser
GCT
[ENA]
¡û
>W09102788
AAIN01000008
Gammaproteobacteria
Shewanella amazonensis SB2B [AAIN]
96980
97071
+
Ser
GCT
[ENA]
¡û
>W09102871
AAIO01000021
Gammaproteobacteria
Shewanella baltica OS155 [AAIO]
313
404
+
Ser
GCT
[ENA]
¡û
>W09102877
AAIO01000021
Gammaproteobacteria
Shewanella baltica OS155 [AAIO]
1083
1174
+
Ser
GCT
[ENA]
¡û
>W09103918
AALB01000025
Gammaproteobacteria
Shewanella putrefaciens CN-32 [AALB]
2020
1929
-
Ser
GCT
[ENA]
¡û
>W09103924
AALB01000025
Gammaproteobacteria
Shewanella putrefaciens CN-32 [AALB]
1289
1198
-
Ser
GCT
[ENA]
¡û
>W09104025
AALH01000011
Gammaproteobacteria
Shewanella sp. ANA-3 [AALH]
115673
115764
+
Ser
GCT
[ENA]
¡û
>W09104031
AALH01000011
Gammaproteobacteria
Shewanella sp. ANA-3 [AALH]
116401
116492
+
Ser
GCT
[ENA]
¡û
>W09104266
AALN01000007
Gammaproteobacteria
Shewanella sp. W3-18-1 [AALN]
22395
22304
-
Ser
GCT
[ENA]
¡û
>W09104272
AALN01000007
Gammaproteobacteria
Shewanella sp. W3-18-1 [AALN]
21664
21573
-
Ser
GCT
[ENA]
¡û
>W09104509
AALS01000053
Gammaproteobacteria
Shewanella loihica PV-4 [AALS]
24090
23999
-
Ser
GCT
[ENA]
¡û
>W09104615
AALX01000056
Gammaproteobacteria
Shewanella sp. MR-4 [AALX]
20373
20282
-
Ser
GCT
[ENA]
¡û
>C191107847
CP033575
Gammaproteobacteria
Shewanella algae KC-Na-R1 [CP033575]
3600957
3600866
-
Ser
GCT
-
¡û
>C191107853
CP033575
Gammaproteobacteria
Shewanella algae KC-Na-R1 [CP033575]
3600321
3600230
-
Ser
GCT
-
¡û
>C191117185
CP034015
Gammaproteobacteria
Shewanella livingstonensis LMG 19866 [CP034015]
1621339
1621430
+
Ser
GCT
-
¡û
>C191117189
CP034015
Gammaproteobacteria
Shewanella livingstonensis LMG 19866 [CP034015]
1621746
1621837
+
Ser
GCT
-
¡û
>C191148770
CP036200
Gammaproteobacteria
Shewanella maritima D4-2 [CP036200]
1213042
1212951
-
Ser
GCT
-
¡û
>C191148774
CP036200
Gammaproteobacteria
Shewanella maritima D4-2 [CP036200]
1212616
1212525
-
Ser
GCT
-
¡û
>C191155914
CP037951
Gammaproteobacteria
Parashewanella tropica MEBiC05444 [CP037951]
2980281
2980190
-
Ser
GCT
-
¡û
>C191155919
CP037951
Gammaproteobacteria
Parashewanella tropica MEBiC05444 [CP037951]
2979752
2979661
-
Ser
GCT
-
¡û
>C191155961
CP037952
Gammaproteobacteria
Parashewanella spongiae HJ039 [CP037952]
1336836
1336927
+
Ser
GCT
-
¡û
>C191155966
CP037952
Gammaproteobacteria
Parashewanella spongiae HJ039 [CP037952]
1337358
1337449
+
Ser
GCT
-
¡û
>C191187087
CP041151
Gammaproteobacteria
Shewanella sp. SNU WT4 [CP041151]
3337399
3337308
-
Ser
GCT
-
¡û
>C191187095
CP041151
Gammaproteobacteria
Shewanella sp. SNU WT4 [CP041151]
3336562
3336471
-
Ser
GCT
-
¡û
>C191187220
CP041153
Gammaproteobacteria
Shewanella marisflavi ECSMB14101 [CP041153]
2977924
2977833
-
Ser
GCT
-
¡û
>C191187225
CP041153
Gammaproteobacteria
Shewanella marisflavi ECSMB14101 [CP041153]
2977377
2977286
-
Ser
GCT
-
¡û
>C191205226
LR134303
Gammaproteobacteria
Shewanella putrefaciens NCTC12093 [LR134303]
3515214
3515305
+
Ser
GCT
-
¡û
>C191205232
LR134303
Gammaproteobacteria
Shewanella putrefaciens NCTC12093 [LR134303]
3515942
3516033
+
Ser
GCT
-
¡û
>C191206473
LR134321
Gammaproteobacteria
Shewanella baltica NCTC10737 [LR134321]
3588934
3588843
-
Ser
GCT
-
¡û
>C191206479
LR134321
Gammaproteobacteria
Shewanella baltica NCTC10737 [LR134321]
3588163
3588072
-
Ser
GCT
-
¡û
>W141801960
JPEO01000003
Gammaproteobacteria
Shewanella mangrovi YQH10 [JPEO]
363727
363636
-
Ser
GCT
[ENA]
¡û
>W141801965
JPEO01000003
Gammaproteobacteria
Shewanella mangrovi YQH10 [JPEO]
363217
363126
-
Ser
GCT
[ENA]
¡û
>W1910237467
FPLD01000005
Gammaproteobacteria
Moritella viscosa [FPLD]
101274
101365
+
Ser
GCT
[ENA]
¡û
>W1910237474
FPLD01000005
Gammaproteobacteria
Moritella viscosa [FPLD]
102293
102384
+
Ser
GCT
[ENA]
¡û
>W1910237869
FPLJ01000005
Gammaproteobacteria
Moritella viscosa [FPLJ]
101391
101482
+
Ser
GCT
[ENA]
¡û
>W1910237873
FPLJ01000006
Gammaproteobacteria
Moritella viscosa [FPLJ]
352
443
+
Ser
GCT
[ENA]
¡û
>W1910282696
FRDQ01000004
Gammaproteobacteria
Moritella viscosa [FRDQ]
101323
101414
+
Ser
GCT
[ENA]
¡û
>W1910282699
FRDQ01000005
Gammaproteobacteria
Moritella viscosa [FRDQ]
92
183
+
Ser
GCT
[ENA]
¡û
>W1910282911
FRDT01000003
Gammaproteobacteria
Moritella viscosa [FRDT]
101236
101327
+
Ser
GCT
[ENA]
¡û
>W1910282917
FRDT01000003
Gammaproteobacteria
Moritella viscosa [FRDT]
102154
102245
+
Ser
GCT
[ENA]
¡û
>W1910644982
LVCY01000002
Gammaproteobacteria
Shewanella algae ACCC [LVCY]
205830
205739
-
Ser
GCT
[ENA]
¡û
>W1910644988
LVCY01000002
Gammaproteobacteria
Shewanella algae ACCC [LVCY]
205194
205103
-
Ser
GCT
[ENA]
¡û
>W1910645105
LVDH01000003
Gammaproteobacteria
Shewanella algae AC [LVDH]
66460
66551
+
Ser
GCT
[ENA]
¡û
>W1910645111
LVDH01000003
Gammaproteobacteria
Shewanella algae AC [LVDH]
67096
67187
+
Ser
GCT
[ENA]
¡û
>W1910645201
LVDK01000015
Gammaproteobacteria
Shewanella algae SYT4 [LVDK]
93067
92976
-
Ser
GCT
[ENA]
¡û
>W1910645207
LVDK01000015
Gammaproteobacteria
Shewanella algae SYT4 [LVDK]
92431
92340
-
Ser
GCT
[ENA]
¡û
>W1910645303
LVDU01000016
Gammaproteobacteria
Shewanella algae YHL [LVDU]
1255
1164
-
Ser
GCT
[ENA]
¡û
>W1910645309
LVDU01000016
Gammaproteobacteria
Shewanella algae YHL [LVDU]
619
528
-
Ser
GCT
[ENA]
¡û
>W1910676933
MCTY01000136
Gammaproteobacteria
Shewanella sp. 10N.286.52.B9 [MCTY]
39394
39303
-
Ser
GCT
[ENA]
¡û
>W1910676938
MCTY01000136
Gammaproteobacteria
Shewanella sp. 10N.286.52.B9 [MCTY]
38881
38790
-
Ser
GCT
[ENA]
¡û
>W1910679495
MCVG01000107
Gammaproteobacteria
Shewanella sp. 10N.286.48.B5 [MCVG]
56766
56857
+
Ser
GCT
[ENA]
¡û
>W1910679500
MCVG01000107
Gammaproteobacteria
Shewanella sp. 10N.286.48.B5 [MCVG]
57279
57370
+
Ser
GCT
[ENA]
¡û
>C09109150
CP001252
Gammaproteobacteria
Shewanella baltica OS223 [CP001252]
1480780
1480871
+
Ser
GCT
[Ensembl]
¡û
>C09109156
CP001252
Gammaproteobacteria
Shewanella baltica OS223 [CP001252]
1481551
1481642
+
Ser
GCT
[Ensembl]
¡û
>W1910905498
NGVS01000004
Gammaproteobacteria
Shewanella carassii 08MAS2251 [NGVS]
25826
25735
-
Ser
GCT
[ENA]
¡û
>W1910905505
NGVS01000004
Gammaproteobacteria
Shewanella carassii 08MAS2251 [NGVS]
25083
24992
-
Ser
GCT
[ENA]
¡û
>W1910905507
NGVS01000004
Gammaproteobacteria
Shewanella carassii 08MAS2251 [NGVS]
24860
24769
-
Ser
GCT
[ENA]
¡û
>W1910905509
NGVS01000004
Gammaproteobacteria
Shewanella carassii 08MAS2251 [NGVS]
24637
24546
-
Ser
GCT
[ENA]
¡û
>W1910905511
NGVS01000004
Gammaproteobacteria
Shewanella carassii 08MAS2251 [NGVS]
24414
24323
-
Ser
GCT
[ENA]
¡û
>C09109792
CP000472
Gammaproteobacteria
Shewanella piezotolerans WP3 [CP000472]
1392699
1392790
+
Ser
GCT
[Ensembl]
¡û
>C09109798
CP000472
Gammaproteobacteria
Shewanella piezotolerans WP3 [CP000472]
1393325
1393416
+
Ser
GCT
[Ensembl]
¡û
>W1910913794
NHRI01000016
Gammaproteobacteria
Shewanella sp. BC20 [NHRI]
7525
7434
-
Ser
GCT
[ENA]
¡û
>W1910913800
NHRI01000016
Gammaproteobacteria
Shewanella sp. BC20 [NHRI]
6798
6707
-
Ser
GCT
[ENA]
¡û
>W1910927050
NIJK01000022
Gammaproteobacteria
Shewanella indica KJW27 [NIJK]
388
297
-
Ser
GCT
[ENA]
¡û
>W1910927088
NIJK01000039
Gammaproteobacteria
Shewanella indica KJW27 [NIJK]
89
180
+
Ser
GCT
[ENA]
¡û
>W1910927212
NIJL01000040
Gammaproteobacteria
Shewanella algae 20-23R [NIJL]
83395
83304
-
Ser
GCT
[ENA]
¡û
>W1910927218
NIJL01000040
Gammaproteobacteria
Shewanella algae 20-23R [NIJL]
82759
82668
-
Ser
GCT
[ENA]
¡û
>W1910927255
NIJM01000039
Gammaproteobacteria
Shewanella chilikensis JC5 [NIJM]
11336
11427
+
Ser
GCT
[ENA]
¡û
>W1910927257
NIJM01000039
Gammaproteobacteria
Shewanella chilikensis JC5 [NIJM]
11531
11622
+
Ser
GCT
[ENA]
¡û
>W1911581902
PGVH01000027
Gammaproteobacteria
Shewanella sp. OPT22 [PGVH]
10623
10532
-
Ser
GCT
[ENA]
¡û
>W1911581907
PGVH01000027
Gammaproteobacteria
Shewanella sp. OPT22 [PGVH]
10089
9998
-
Ser
GCT
[ENA]
¡û
>W1911710015
QPQT01000003
Gammaproteobacteria
Shewanella algidipiscicola LMG 23746 [QPQT]
64726
64817
+
Ser
GCT
[ENA]
¡û
>W1911710020
QPQT01000003
Gammaproteobacteria
Shewanella algidipiscicola LMG 23746 [QPQT]
65275
65366
+
Ser
GCT
[ENA]
¡û
>W1911809460
QYYH01000034
Gammaproteobacteria
Parashewanella spongiae KCTC 22492 [QYYH]
36198
36289
+
Ser
GCT
[ENA]
¡û
>W1911809465
QYYH01000034
Gammaproteobacteria
Parashewanella spongiae KCTC 22492 [QYYH]
36720
36811
+
Ser
GCT
[ENA]
¡û
>W1911812314
QZEI01000017
Gammaproteobacteria
Parashewanella curva C51 [QZEI]
74578
74487
-
Ser
GCT
[ENA]
¡û
>W1911812319
QZEI01000017
Gammaproteobacteria
Parashewanella curva C51 [QZEI]
74047
73956
-
Ser
GCT
[ENA]
¡û
>W1810005556
BFBQ01000001
Gammaproteobacteria
Shewanella halifaxensis 6JANF4-E-4 [BFBQ]
288167
288076
-
Ser
GCT
[ENA]
¡û
>W1810005562
BFBQ01000001
Gammaproteobacteria
Shewanella halifaxensis 6JANF4-E-4 [BFBQ]
287547
287456
-
Ser
GCT
[ENA]
¡û
>W1810005565
BFBQ01000001
Gammaproteobacteria
Shewanella halifaxensis 6JANF4-E-4 [BFBQ]
287183
287092
-
Ser
GCT
[ENA]
¡û
>W1810073437
PEGD01000002
Gammaproteobacteria
Shewanella xiamenensis AS58 [PEGD]
156781
156690
-
Ser
GCT
[ENA]
¡û
>W1810073444
PEGD01000002
Gammaproteobacteria
Shewanella xiamenensis AS58 [PEGD]
155956
155865
-
Ser
GCT
[ENA]
¡û
>W1810154317
PIZK01000010
Gammaproteobacteria
Alteromonadales bacterium alter-6D02 [PIZK]
137159
137068
-
Ser
GCT
[ENA]
¡û
>W1810154345
PIZK01000021
Gammaproteobacteria
Alteromonadales bacterium alter-6D02 [PIZK]
92371
92280
-
Ser
GCT
[ENA]
¡û
>W1810423008
PYSG01000002
Gammaproteobacteria
Shewanella morhuae CW7 [PYSG]
2318982
2318891
-
Ser
GCT
[ENA]
¡û
>W1810423014
PYSG01000002
Gammaproteobacteria
Shewanella morhuae CW7 [PYSG]
2318215
2318124
-
Ser
GCT
[ENA]
¡û
>W1810585868
QFDC01000017
Gammaproteobacteria
Shewanella algae Sh392 [QFDC]
30874
30965
+
Ser
GCT
[ENA]
¡û
>W1810585874
QFDC01000017
Gammaproteobacteria
Shewanella algae Sh392 [QFDC]
31510
31601
+
Ser
GCT
[ENA]
¡û
>W1810587752
QFLG01000029
Gammaproteobacteria
Shewanella xiamenensis DCB2-1 [QFLG]
72422
72513
+
Ser
GCT
[ENA]
¡û
>W1810587783
QFLG01000081
Gammaproteobacteria
Shewanella xiamenensis DCB2-1 [QFLG]
805
714
-
Ser
GCT
[ENA]
¡û
>W1810671693
QJSY01000032
Gammaproteobacteria
Shewanella chilikensis JC5 [QJSY]
29630
29539
-
Ser
GCT
[ENA]
¡û
>W1810671699
QJSY01000032
Gammaproteobacteria
Shewanella chilikensis JC5 [QJSY]
28995
28904
-
Ser
GCT
[ENA]
¡û
>W1810721538
QNSC01000003
Gammaproteobacteria
Shewanella putrefaciens 97 [QNSC]
197074
197165
+
Ser
GCT
[ENA]
¡û
>W1810721545
QNSC01000003
Gammaproteobacteria
Shewanella putrefaciens 97 [QNSC]
197972
198063
+
Ser
GCT
[ENA]
¡û
>W1810786550
QRCS01000013
Gammaproteobacteria
Shewanella corallii A687 [QRCS]
467546
467455
-
Ser
GCT
[ENA]
¡û
>W1810786557
QRCS01000013
Gammaproteobacteria
Shewanella corallii A687 [QRCS]
466784
466693
-
Ser
GCT
[ENA]
¡û
>WENV003392
AACY020092195
Marine microbial communities from Global Ocean Sampling (GOS)
24394
24487
+
Ser
GCT
[ENA]
>WENV003398
AACY020092195
Marine microbial communities from Global Ocean Sampling (GOS)
25125
25218
+
Ser
GCT
[ENA]
>W1510077696
CDQH01000018
Gammaproteobacteria
Shewanella algae MARS 14 [CDQH]
938277
938186
-
Ser
GCT
[ENA]
¡û
>W1510077698
CDQH01000018
Gammaproteobacteria
Shewanella algae MARS 14 [CDQH]
937973
937882
-
Ser
GCT
[ENA]
¡û
>W1510077704
CDQH01000018
Gammaproteobacteria
Shewanella algae MARS 14 [CDQH]
937337
937246
-
Ser
GCT
[ENA]
¡û
>W10119032
ADVH01000001
Gammaproteobacteria
Shewanella baltica OS678 [ADVH]
93691
93600
-
Ser
GCT
[ENA]
¡û
>W10119038
ADVH01000001
Gammaproteobacteria
Shewanella baltica OS678 [ADVH]
92918
92827
-
Ser
GCT
[ENA]
¡û
>W10126057
AECY01000003
Gammaproteobacteria
Shewanella baltica OS183 [AECY]
342648
342557
-
Ser
GCT
[ENA]
¡û
>W10126063
AECY01000003
Gammaproteobacteria
Shewanella baltica OS183 [AECY]
341886
341795
-
Ser
GCT
[ENA]
¡û
>W10126361
AEDE01000001
Gammaproteobacteria
Shewanella baltica BA175 [AEDE]
469090
469181
+
Ser
GCT
[ENA]
¡û
>W10126367
AEDE01000001
Gammaproteobacteria
Shewanella baltica BA175 [AEDE]
469852
469943
+
Ser
GCT
[ENA]
¡û
>W1511302137
JPII01000029
Gammaproteobacteria
Shewanella sp. cp20 [JPII]
190721
190812
+
Ser
GCT
[ENA]
¡û
>W1511302142
JPII01000029
Gammaproteobacteria
Shewanella sp. cp20 [JPII]
191265
191356
+
Ser
GCT
[ENA]
¡û
>W1511306525
JPMA01000012
Gammaproteobacteria
Shewanella algae C6G3 [JPMA]
126
217
+
Ser
GCT
[ENA]
¡û
>C11119383
CP002767
Gammaproteobacteria
Shewanella baltica BA175 [CP002767]
1485169
1485260
+
Ser
GCT
[Ensembl]
¡û
>C11119389
CP002767
Gammaproteobacteria
Shewanella baltica BA175 [CP002767]
1485931
1486022
+
Ser
GCT
[Ensembl]
¡û
>W1511366789
JSFF01000005
Gammaproteobacteria
Shewanella sp. ECSMB14101 [JSFF]
127213
127122
-
Ser
GCT
[ENA]
¡û
>W1511366797
JSFF01000005
Gammaproteobacteria
Shewanella sp. ECSMB14101 [JSFF]
126317
126226
-
Ser
GCT
[ENA]
¡û
>C11119525
CP002811
Gammaproteobacteria
Shewanella baltica OS117 [CP002811]
3741291
3741200
-
Ser
GCT
[Ensembl]
¡û
>C11119531
CP002811
Gammaproteobacteria
Shewanella baltica OS117 [CP002811]
3740521
3740430
-
Ser
GCT
[Ensembl]
¡û
>C11119623
CP002383
Gammaproteobacteria
Shewanella baltica OS678 [CP002383]
3791712
3791621
-
Ser
GCT
[Ensembl]
¡û
>C11119629
CP002383
Gammaproteobacteria
Shewanella baltica OS678 [CP002383]
3790939
3790848
-
Ser
GCT
[Ensembl]
¡û
>W1511403522
JTLE01000094
Gammaproteobacteria
Shewanella sp. ZOR0012 [JTLE]
813992
814083
+
Ser
GCT
[ENA]
¡û
>C11121560
CP002457
Gammaproteobacteria
Shewanella putrefaciens [CP002457]
3251365
3251274
-
Ser
GCT
[Ensembl]
¡û
>C11121566
CP002457
Gammaproteobacteria
Shewanella putrefaciens [CP002457]
3250634
3250543
-
Ser
GCT
[Ensembl]
¡û
>W11125204
ADVH01000001
Gammaproteobacteria
Shewanella baltica OS678 [ADVH]
93691
93600
-
Ser
GCT
[ENA]
¡û
>W11125210
ADVH01000001
Gammaproteobacteria
Shewanella baltica OS678 [ADVH]
92918
92827
-
Ser
GCT
[ENA]
¡û
>W1511477938
JWGX01000025
Gammaproteobacteria
Shewanella sp. ECSMB14102 [JWGX]
64991
64900
-
Ser
GCT
[ENA]
¡û
>W1511477944
JWGX01000025
Gammaproteobacteria
Shewanella sp. ECSMB14102 [JWGX]
64356
64265
-
Ser
GCT
[ENA]
¡û
>W1511477948
JWGX01000025
Gammaproteobacteria
Shewanella sp. ECSMB14102 [JWGX]
63947
63856
-
Ser
GCT
[ENA]
¡û
>W1511477950
JWGX01000025
Gammaproteobacteria
Shewanella sp. ECSMB14102 [JWGX]
63724
63633
-
Ser
GCT
[ENA]
¡û
>W1511477952
JWGX01000025
Gammaproteobacteria
Shewanella sp. ECSMB14102 [JWGX]
63501
63410
-
Ser
GCT
[ENA]
¡û
>W11133318
AECY01000003
Gammaproteobacteria
Shewanella baltica OS183 [AECY]
342648
342557
-
Ser
GCT
[ENA]
¡û
>W11133324
AECY01000003
Gammaproteobacteria
Shewanella baltica OS183 [AECY]
341886
341795
-
Ser
GCT
[ENA]
¡û
>W11133622
AEDE01000001
Gammaproteobacteria
Shewanella baltica BA175 [AEDE]
469090
469181
+
Ser
GCT
[ENA]
¡û
>W11133628
AEDE01000001
Gammaproteobacteria
Shewanella baltica BA175 [AEDE]
469852
469943
+
Ser
GCT
[ENA]
¡û
>W11169923
AFOZ01000035
Gammaproteobacteria
Shewanella sp. HN-41 [AFOZ]
33449
33358
-
Ser
GCT
[ENA]
¡û
>W11169925
AFOZ01000036
Gammaproteobacteria
Shewanella sp. HN-41 [AFOZ]
306
215
-
Ser
GCT
[ENA]
¡û
>W11178444
AGEX01000004
Gammaproteobacteria
Shewanella baltica OS625 [AGEX]
529465
529374
-
Ser
GCT
[ENA]
¡û
>W11178477
AGEX01000010
Gammaproteobacteria
Shewanella baltica OS625 [AGEX]
575
484
-
Ser
GCT
[ENA]
¡û
>W121103301
AKZL01000009
Gammaproteobacteria
Shewanella sp. POL2 [AKZL]
17083
16992
-
Ser
GCT
[ENA]
¡û
>W1610072064
BCUO01000005
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 = NBRC 3908 [BCUO]
162590
162681
+
Ser
GCT
[ENA]
¡û
>W1610072070
BCUO01000005
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 = NBRC 3908 [BCUO]
163321
163412
+
Ser
GCT
[ENA]
¡û
>W1610460591
FKJK01000004
Gammaproteobacteria
Shewanella woodyi Alg231_23 [FKJK]
7836
7745
-
Ser
GCT
[ENA]
¡û
>W1610460596
FKJK01000004
Gammaproteobacteria
Shewanella woodyi Alg231_23 [FKJK]
7253
7162
-
Ser
GCT
[ENA]
¡û
>W1610460601
FKJK01000004
Gammaproteobacteria
Shewanella woodyi Alg231_23 [FKJK]
6556
6465
-
Ser
GCT
[ENA]
¡û
>W1610617909
LGYY01000263
Gammaproteobacteria
Shewanella sp. Sh95 [LGYY]
6626
6535
-
Ser
GCT
[ENA]
¡û
>W1610617915
LGYY01000263
Gammaproteobacteria
Shewanella sp. Sh95 [LGYY]
5895
5804
-
Ser
GCT
[ENA]
¡û
>W1610781516
LOCN01000004
Gammaproteobacteria
Moritella sp. JT01 [LOCN]
20765
20674
-
Ser
GCT
[ENA]
¡û
>W1610781523
LOCN01000004
Gammaproteobacteria
Moritella sp. JT01 [LOCN]
19718
19627
-
Ser
GCT
[ENA]
¡û
>W1610875208
LRDC01000029
Gammaproteobacteria
Shewanella frigidimarina [LRDC]
38246
38155
-
Ser
GCT
[ENA]
¡û
>W1610875212
LRDC01000029
Gammaproteobacteria
Shewanella frigidimarina [LRDC]
37838
37747
-
Ser
GCT
[ENA]
¡û
>W1610982602
LWED01000006
Gammaproteobacteria
Shewanella baltica [LWED]
258
167
-
Ser
GCT
[ENA]
¡û
>W1610982610
LWED01000014
Gammaproteobacteria
Shewanella baltica [LWED]
117850
117759
-
Ser
GCT
[ENA]
¡û
>W1710069266
BCUO01000005
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 = NBRC 3908 [BCUO]
162590
162681
+
Ser
GCT
[ENA]
¡û
>W1710069272
BCUO01000005
Gammaproteobacteria
Shewanella putrefaciens JCM 20190 = NBRC 3908 [BCUO]
163321
163412
+
Ser
GCT
[ENA]
¡û
>W1710460155
FKJK01000004
Gammaproteobacteria
Shewanella woodyi Alg231_23 [FKJK]
7836
7745
-
Ser
GCT
[ENA]
¡û
>W1710460160
FKJK01000004
Gammaproteobacteria
Shewanella woodyi Alg231_23 [FKJK]
7253
7162
-
Ser
GCT
[ENA]
¡û
>W1710460165
FKJK01000004
Gammaproteobacteria
Shewanella woodyi Alg231_23 [FKJK]
6556
6465
-
Ser
GCT
[ENA]
¡û
>W1710597911
FTNN01000001
Gammaproteobacteria
Shewanella morhuae [FTNN]
293963
294054
+
Ser
GCT
[ENA]
¡û
>W1710597914
FTNN01000001
Gammaproteobacteria
Shewanella morhuae [FTNN]
294354
294445
+
Ser
GCT
[ENA]
¡û
>W1710692497
JZWJ01000135
Gammaproteobacteria
Shewanella xiamenensis [JZWJ]
179087
179178
+
Ser
GCT
[ENA]
¡û
>W1710692503
JZWJ01000135
Gammaproteobacteria
Shewanella xiamenensis [JZWJ]
179818
179909
+
Ser
GCT
[ENA]
¡û
>W1710706700
LDOA01000001
Gammaproteobacteria
Shewanella xiamenensis [LDOA]
303248
303157
-
Ser
GCT
[ENA]
¡û
>W1710706706
LDOA01000001
Gammaproteobacteria
Shewanella xiamenensis [LDOA]
302517
302426
-
Ser
GCT
[ENA]
¡û
>W1710744084
LGYY01000263
Gammaproteobacteria
Shewanella sp. Sh95 [LGYY]
6626
6535
-
Ser
GCT
[ENA]
¡û
>W1710744090
LGYY01000263
Gammaproteobacteria
Shewanella sp. Sh95 [LGYY]
5895
5804
-
Ser
GCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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